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人为活动导致恒河城市段微生物群落减少。

Anthropogenic Activities Induce Depletion in Microbial Communities at Urban Sites of the River Ganges.

作者信息

Jani Kunal, Ghattargi Vikas, Pawar Shrikant, Inamdar Mitali, Shouche Yogesh, Sharma Avinash

机构信息

National Centre for Microbial Resource, National Centre for Cell Science, Central Tower, Sai Trinity Building Garware Circle, Sutarwadi, Pashan, Pune, Maharashtra, 411021, India.

Center for Citizen Science, Pune, Maharashtra, 411033, India.

出版信息

Curr Microbiol. 2018 Jan;75(1):79-83. doi: 10.1007/s00284-017-1352-5. Epub 2017 Sep 7.

Abstract

The Ganges is the largest river of India, worshiped by Hindus with a belief that bathing in the river causes the remission of sins and is considered very pure. It is heavily polluted by the unrestricted human usage including ritual practices, urbanization, and industrialization. Such perturbations may subsequently influence the bacterial community composition and ecosystem functioning. Here, we applied targeted amplicon sequencing to determine the impact of spatial variation on the microbial community assemblage of the Ganga River. The river bacterial community demonstrates taxonomic variability across the sites with accumulation of Firmicutes (20.9%) Verrucomicrobia (6.09%), Actinobacteria (4.51%), and Synergistetes (1.16%), at rural site while Proteobacteria (49.4%) and Bacteroidetes (12.7%) predominate at urban sites. Furthermore, sites under study establish the unique taxonomic signature which could represent the impact of spatial variation on the microbial community assemblage.

摘要

恒河是印度最大的河流,印度教徒对其顶礼膜拜,认为在河中沐浴能洗净罪孽,河水无比纯净。然而,由于包括宗教仪式、城市化和工业化在内的无节制人类活动,恒河受到了严重污染。这些干扰可能会进而影响细菌群落组成和生态系统功能。在此,我们运用靶向扩增子测序技术来确定空间变异对恒河微生物群落组合的影响。河流细菌群落在不同位点呈现出分类学上的变异性,在农村位点厚壁菌门(20.9%)、疣微菌门(6.09%)、放线菌门(4.51%)和互养菌门(1.16%)有所富集,而在城市位点变形菌门(49.4%)和拟杆菌门(12.7%)占主导地位。此外,所研究的位点确立了独特的分类学特征,这可能代表了空间变异对微生物群落组合的影响。

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