• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种基于QTL定位的菌株鉴定新诊断资源。

A New Diagnostic Resource for Strain Identification Based on QTL Mapping.

作者信息

Sim Sheina B, Ruiz-Arce Raul, Barr Norman B, Geib Scott M

机构信息

USDA-ARS Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Crop and Commodity Protection Research Unit, Hilo, Hawaii 96720.

Center for Plant Health Science and Technology, Mission Laboratory, USDA-APHIS, Edinburg, Texas 78541.

出版信息

G3 (Bethesda). 2017 Nov 6;7(11):3637-3647. doi: 10.1534/g3.117.300169.

DOI:10.1534/g3.117.300169
PMID:28889103
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5677166/
Abstract

The Mediterranean fruit fly (Wiedemann) is a destructive agricultural pest and the subject of exclusion efforts in many countries. Suppression and eradication of invasive populations to prevent its establishment is facilitated by the release of sterile males using the sterile insect technique (SIT). In SIT release areas, it is critical to accurately discriminate between released sterile males and wild individuals to detect extremely rare invasive individuals in areas inundated with millions of sterile male flies. Current methods for discrimination exist but are not always definitive, and a more reliable method is necessary. To address this, we developed a genotyping assay that can be used to discriminate between sterile males from the SIT strain and wild individuals. This was achieved by identifying single nucleotide polymorphisms (SNPs) linked to the maintained traits that facilitate male-only releases, white pupae () and temperature-sensitive lethal (), via QTL mapping. This resulted in the identification of one SNP that was in near-perfect linkage disequilibrium between genotype at this locus and the pupal color phenotype. Medfly from many SIT colonies and wild individuals from across its geographic range were genotyped for this locus, and results show its consistency in identifying SIT flies. In addition, linkage and QTL mapping of and have larger impacts as they can serve as foundational tools to identify the genetic basis of traits that facilitate the separation of males from female flies, which can be used to develop SIT programs in related species.

摘要

地中海实蝇(维德曼)是一种具有破坏性的农业害虫,也是许多国家防控工作的重点对象。利用不育昆虫技术(SIT)释放不育雄虫有助于抑制和根除入侵种群,防止其定殖。在SIT释放区域,准确区分释放的不育雄虫和野生个体对于在数百万不育雄虫充斥的区域中检测极其罕见的入侵个体至关重要。目前存在一些鉴别方法,但并不总是具有决定性,因此需要一种更可靠的方法。为了解决这个问题,我们开发了一种基因分型检测方法,可用于区分SIT品系的不育雄虫和野生个体。这是通过数量性状基因座(QTL)定位,识别与有助于只释放雄虫的保持性状(白蛹()和温度敏感致死())相关的单核苷酸多态性(SNP)来实现的。这导致鉴定出一个SNP,该位点的基因型与蛹色表型之间几乎完全处于连锁不平衡状态。对许多SIT种群的地中海实蝇以及来自其地理分布范围内的野生个体进行了该位点的基因分型,结果表明其在识别SIT果蝇方面具有一致性。此外,对和的连锁和QTL定位具有更大的影响,因为它们可以作为基础工具来识别有助于将雄蝇与雌蝇分离的性状的遗传基础,可用于开发相关物种的SIT计划。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/98a651a9df8a/3637f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/46d08a2b5bda/3637f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/9c8a875a050a/3637f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/91b26f914b84/3637f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/4a3f9c458a88/3637f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/e246f138c1ef/3637f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/98a651a9df8a/3637f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/46d08a2b5bda/3637f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/9c8a875a050a/3637f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/91b26f914b84/3637f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/4a3f9c458a88/3637f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/e246f138c1ef/3637f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0815/5677166/98a651a9df8a/3637f6.jpg

相似文献

1
A New Diagnostic Resource for Strain Identification Based on QTL Mapping.一种基于QTL定位的菌株鉴定新诊断资源。
G3 (Bethesda). 2017 Nov 6;7(11):3637-3647. doi: 10.1534/g3.117.300169.
2
Mitochondrial Single Nucleotide Polymorphisms in Ceratitis capitata (Diptera: Tephritidae) Can Distinguish Sterile, Released Flies from Wild Flies in Various Regions of the World.地中海实蝇(双翅目:实蝇科)中的线粒体单核苷酸多态性能够区分世界不同地区的不育释放蝇和野生蝇。
J Econ Entomol. 2015 Feb;108(1):301-6. doi: 10.1093/jee/tou027. Epub 2015 Jan 24.
3
Deep orange gene editing triggers temperature-sensitive lethal phenotypes in Ceratitis capitata.深橙色基因编辑在黑腹果蝇中触发温度敏感致死表型。
BMC Biotechnol. 2024 Feb 1;24(1):7. doi: 10.1186/s12896-024-00832-x.
4
The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species.地中海实蝇(Ceratitis capitata (Wiedemann))的全基因组序列揭示了对一种高度入侵性害虫物种的生物学和适应性进化的见解。
Genome Biol. 2016 Sep 22;17(1):192. doi: 10.1186/s13059-016-1049-2.
5
Genetic sexing strains in medfly, Ceratitis capitata, sterile insect technique programmes.地中海实蝇(Ceratitis capitata)遗传性别品系与不育昆虫技术计划
Genetica. 2002 Sep;116(1):5-13. doi: 10.1023/a:1020951407069.
6
Evaluation of Quality Production Parameters and Mating Behavior of Novel Genetic Sexing Strains of the Mediterranean Fruit Fly Ceratitis capitata (Wiedemann) (Diptera: Tephritidae).地中海实蝇(Ceratitis capitata (Wiedemann))(双翅目:实蝇科)新型遗传性别品系的质量生产参数及交配行为评估
PLoS One. 2016 Jun 23;11(6):e0157679. doi: 10.1371/journal.pone.0157679. eCollection 2016.
7
Genomic and cytogenetic analysis of the Ceratitis capitata temperature-sensitive lethal region.黑腹果蝇温度敏感致死区的基因组和细胞遗传学分析。
G3 (Bethesda). 2023 Jun 1;13(6). doi: 10.1093/g3journal/jkad074.
8
Improving the Phenotypic Properties of the Ceratitis capitata (Diptera: Tephritidae) Temperature-Sensitive Lethal Genetic Sexing Strain in Support of Sterile Insect Technique Applications.提高地中海实蝇(双翅目:瘿蚊科)温度敏感型致死遗传性别控制品系的表型特性,以支持不育昆虫技术的应用。
J Econ Entomol. 2020 Dec 9;113(6):2688-2694. doi: 10.1093/jee/toaa220.
9
A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California.从基因组角度评估用于加利福尼亚地中海实蝇根除计划中大量饲养的 SIT 果蝇的质量。
BMC Genomics. 2014 Feb 5;15:98. doi: 10.1186/1471-2164-15-98.
10
On the impact of re-mating and residual fertility on the Sterile Insect Technique efficacy: Case study with the medfly, Ceratitis capitata.再交配和剩余繁殖力对不育昆虫技术效果的影响:以地中海实蝇为例。
PLoS Comput Biol. 2024 May 6;20(5):e1012052. doi: 10.1371/journal.pcbi.1012052. eCollection 2024 May.

引用本文的文献

1
Conservation of and temperature-sensitive lethal mutations between and .X与Y之间的保守性以及温度敏感致死突变
Front Insect Sci. 2024 Mar 4;4:1249103. doi: 10.3389/finsc.2024.1249103. eCollection 2024.
2
Genomic and cytogenetic analysis of the Ceratitis capitata temperature-sensitive lethal region.黑腹果蝇温度敏感致死区的基因组和细胞遗传学分析。
G3 (Bethesda). 2023 Jun 1;13(6). doi: 10.1093/g3journal/jkad074.
3
Lessons from Drosophila: Engineering Genetic Sexing Strains with Temperature-Sensitive Lethality for Sterile Insect Technique Applications.

本文引用的文献

1
LinkageMapView-rendering high-resolution linkage and QTL maps.LinkageMapView - 绘制高分辨率连锁图谱和数量性状基因座图谱。
Bioinformatics. 2018 Jan 15;34(2):306-307. doi: 10.1093/bioinformatics/btx576.
2
A Chromosome-Scale Assembly of the Genome Provides Insight to the Genetic Basis of .该基因组的染色体水平组装为[具体内容]的遗传基础提供了见解。 (原文中“of.”处信息不完整,翻译可能存在一定局限性 )
G3 (Bethesda). 2017 Jun 7;7(6):1927-1940. doi: 10.1534/g3.117.040170.
3
The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species.
果蝇的经验教训:利用温度敏感致死性构建用于昆虫不育技术应用的遗传性别品系。
Insects. 2021 Mar 13;12(3):243. doi: 10.3390/insects12030243.
4
White pupae phenotype of tephritids is caused by parallel mutations of a MFS transporter.实蝇的白蛹表型是由一个 MFS 转运蛋白的平行突变引起的。
Nat Commun. 2021 Jan 21;12(1):491. doi: 10.1038/s41467-020-20680-5.
5
Disjunction between canola distribution and the genetic structure of its recently described pest, the canola flower midge ().油菜分布与其最近描述的害虫——油菜小花蝽的遗传结构之间的脱节。
Ecol Evol. 2020 Oct 26;10(23):13284-13296. doi: 10.1002/ece3.6927. eCollection 2020 Dec.
地中海实蝇(Ceratitis capitata (Wiedemann))的全基因组序列揭示了对一种高度入侵性害虫物种的生物学和适应性进化的见解。
Genome Biol. 2016 Sep 22;17(1):192. doi: 10.1186/s13059-016-1049-2.
4
Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F2 Recombinant Crosses as an Example.利用Lep-MAP2构建超密集连锁图谱:以棘鱼F2重组杂交为例。
Genome Biol Evol. 2015 Dec 14;8(1):78-93. doi: 10.1093/gbe/evv250.
5
Extraordinary conservation of entire chromosomes in insects over long evolutionary periods.昆虫在漫长进化时期内整条染色体的非凡保守性。
Evolution. 2016 Jan;70(1):229-34. doi: 10.1111/evo.12831. Epub 2015 Dec 24.
6
Targeted Chromosomal Translocations and Essential Gene Knockout Using CRISPR/Cas9 Technology in Caenorhabditis elegans.利用CRISPR/Cas9技术在秀丽隐杆线虫中进行靶向染色体易位和必需基因敲除
Genetics. 2015 Dec;201(4):1295-306. doi: 10.1534/genetics.115.181883. Epub 2015 Oct 19.
7
Mitochondrial Single Nucleotide Polymorphisms in Ceratitis capitata (Diptera: Tephritidae) Can Distinguish Sterile, Released Flies from Wild Flies in Various Regions of the World.地中海实蝇(双翅目:实蝇科)中的线粒体单核苷酸多态性能够区分世界不同地区的不育释放蝇和野生蝇。
J Econ Entomol. 2015 Feb;108(1):301-6. doi: 10.1093/jee/tou027. Epub 2015 Jan 24.
8
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.使用DESeq2对RNA测序数据的倍数变化和离散度进行适度估计。
Genome Biol. 2014;15(12):550. doi: 10.1186/s13059-014-0550-8.
9
Development, genetic and cytogenetic analyses of genetic sexing strains of the Mexican fruit fly, Anastrepha ludens Loew (Diptera: Tephritidae).墨西哥实蝇(Anastrepha ludens Loew,双翅目:实蝇科)遗传性别品系的发育、遗传及细胞遗传学分析
BMC Genet. 2014;15 Suppl 2(Suppl 2):S1. doi: 10.1186/1471-2156-15-S2-S1. Epub 2014 Dec 1.
10
Next maSigPro: updating maSigPro bioconductor package for RNA-seq time series.Next maSigPro:更新用于RNA测序时间序列的maSigPro生物导体包。
Bioinformatics. 2014 Sep 15;30(18):2598-602. doi: 10.1093/bioinformatics/btu333. Epub 2014 Jun 3.