Fuessel Susanne, Lohse-Fischer Andrea, Vu Van Dana, Salomo Karsten, Erdmann Kati, Wirth Manfred P
Department of Urology, Technische Universität Dresden, 01307, Dresden, Germany.
Methods Mol Biol. 2018;1655:201-226. doi: 10.1007/978-1-4939-7234-0_16.
MicroRNAs are small noncoding RNAs which regulate the expression of genes involved in a multitude of cellular processes. Dysregulation of microRNAs and-in consequence-of the affected pathways is frequently observed in numerous pathologies including cancers. Therefore, tumor-related alterations in microRNA expression and function can reflect molecular processes of tumor onset and progression qualifying microRNAs as potential diagnostic and prognostic biomarkers.In particular, microRNAs with differential expression in bladder cancer (BCa) might represent promising tools for noninvasive tumor detection in urine. This would be helpful not only for diagnostic and monitoring purposes but also for therapeutic decisions. Detection and quantification of BCa-associated microRNAs in urine can be performed using the cellular sediment, which also contains BCa cells, or in exosomes originating from those cells. Methods for isolation of exosomes from urine, extraction of total RNA from cells and exosomes as well as techniques for RNA quantification, reverse transcription, and qPCR-based quantification of microRNA expression levels are described herein.
微小RNA是一类小的非编码RNA,可调节参与多种细胞过程的基因表达。在包括癌症在内的众多病理过程中,经常观察到微小RNA的失调以及由此导致的相关信号通路的异常。因此,肿瘤相关的微小RNA表达和功能改变可以反映肿瘤发生和进展的分子过程,这使得微小RNA成为潜在的诊断和预后生物标志物。特别是,在膀胱癌(BCa)中差异表达的微小RNA可能是尿液中无创肿瘤检测的有前景的工具。这不仅有助于诊断和监测,也有助于治疗决策。可以使用细胞沉淀物(其中也含有BCa细胞)或源自这些细胞的外泌体来检测和定量尿液中与BCa相关的微小RNA。本文描述了从尿液中分离外泌体、从细胞和外泌体中提取总RNA的方法,以及RNA定量、逆转录和基于qPCR的微小RNA表达水平定量技术。