Pods Jurgis
Interdisciplinary Center for Scientific Computing, University of Heidelberg, Im Neuenheimer Feld 368, 69120 Heidelberg, Germany. E-mail:
J Integr Neurosci. 2017;16(1):19-32. doi: 10.3233/JIN-170009.
The extracellular space has an ambiguous role in neuroscience. It is present in every physiologically relevant system and often used as a measurement site in experimental recordings, but it has received subordinate attention compared to the intracellular domain. In computational modeling, it is often regarded as a passive, homogeneous resistive medium with a constant conductivity, which greatly simplifies the computation of extracellular potentials. However, novel studies have shown that local ionic diffusion and capacitive effects of electrically active membranes can have a substantial impact on the extracellular potential. These effects can not be described by traditional models, and they have been subject to recent theoretical and experimental analyses. We strive to give an overview over current progress in modeling the extracellular space with special regard towards the concentration and potential dynamics on different temporal and spatial scales. Three models with distinct assumptions and levels of detail are compared both theoretically and by means of numerical simulations: the classical volume conductor (VC) model, which is most frequently used in form of the line source approximation (LSA); the biophysically detailed, but computationally intensive Poisson-Nernst-Planck model of electrodiffusion (PNP); and an intermediate model called the electroneutral model (EN). The results clearly show that there is no one model for all applications, as they show significantly different responses - especially close to neuronal membranes. Finally, we list some common use cases for model simulations and give recommendations on which model to use in each situation.
细胞外空间在神经科学中扮演着一个模糊的角色。它存在于每个生理相关系统中,并且经常在实验记录中用作测量部位,但与细胞内区域相比,它受到的关注较少。在计算建模中,它通常被视为具有恒定电导率的被动、均匀电阻介质,这极大地简化了细胞外电位的计算。然而,新的研究表明,电活性膜的局部离子扩散和电容效应会对细胞外电位产生重大影响。这些效应无法用传统模型描述,并且最近受到了理论和实验分析。我们努力概述细胞外空间建模的当前进展,特别关注不同时间和空间尺度上的浓度和电位动态。通过理论和数值模拟比较了三种具有不同假设和详细程度的模型:经典的容积导体(VC)模型,它最常以线源近似(LSA)的形式使用;生物物理详细但计算密集的电扩散泊松 - 能斯特 - 普朗克模型(PNP);以及一个称为电中性模型(EN)的中间模型。结果清楚地表明,没有一种模型适用于所有应用,因为它们表现出显著不同的响应——尤其是在靠近神经元膜的地方。最后,我们列出了模型模拟的一些常见用例,并针对每种情况使用哪种模型给出建议。