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傅里叶叠层显微镜的系统校准方法

System calibration method for Fourier ptychographic microscopy.

作者信息

Pan An, Zhang Yan, Zhao Tianyu, Wang Zhaojun, Dan Dan, Lei Ming, Yao Baoli

机构信息

Chinese Academy of Sciences, Xi'an Institute of Optics and Precision Mechanics, State Key Laboratory, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

J Biomed Opt. 2017 Sep;22(9):1-11. doi: 10.1117/1.JBO.22.9.096005.

DOI:10.1117/1.JBO.22.9.096005
PMID:28901054
Abstract

Fourier ptychographic microscopy (FPM) is a recently proposed computational imaging technique with both high-resolution and wide field of view. In current FPM imaging platforms, systematic error sources come from aberrations, light-emitting diode (LED) intensity fluctuation, parameter imperfections, and noise, all of which may severely corrupt the reconstruction results with similar artifacts. Therefore, it would be unlikely to distinguish the dominating error from these degraded reconstructions without any preknowledge. In addition, systematic error is generally a mixture of various error sources in the real situation, and it cannot be separated due to their mutual restriction and conversion. To this end, we report a system calibration procedure, termed SC-FPM, to calibrate the mixed systematic errors simultaneously from an overall perspective, based on the simulated annealing algorithm, the LED intensity correction method, the nonlinear regression process, and the adaptive step-size strategy, which involves the evaluation of an error metric at each iteration step, followed by the re-estimation of accurate parameters. The performance achieved both in simulations and experiments demonstrates that the proposed method outperforms other state-of-the-art algorithms. The reported system calibration scheme improves the robustness of FPM, relaxes the experiment conditions, and does not require any preknowledge, which makes the FPM more pragmatic.

摘要

傅里叶叠层显微镜(FPM)是一种最近提出的兼具高分辨率和宽视场的计算成像技术。在当前的FPM成像平台中,系统误差源来自像差、发光二极管(LED)强度波动、参数不完善和噪声,所有这些都可能以类似的伪影严重破坏重建结果。因此,在没有任何先验知识的情况下,不太可能从这些退化的重建中区分出主要误差。此外,在实际情况下,系统误差通常是各种误差源的混合,由于它们之间的相互制约和转换而无法分离。为此,我们报告了一种系统校准程序,称为SC-FPM,基于模拟退火算法、LED强度校正方法、非线性回归过程和自适应步长策略,从整体角度同时校准混合系统误差,这涉及在每个迭代步骤评估误差度量,然后重新估计准确参数。在模拟和实验中取得的性能表明,所提出的方法优于其他现有算法。所报告的系统校准方案提高了FPM的鲁棒性,放宽了实验条件,并且不需要任何先验知识,这使得FPM更加实用。

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System calibration method for Fourier ptychographic microscopy.傅里叶叠层显微镜的系统校准方法
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