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人类转录因子IIH的冷冻电子显微镜结构

The cryo-electron microscopy structure of human transcription factor IIH.

作者信息

Greber Basil J, Nguyen Thi Hoang Duong, Fang Jie, Afonine Pavel V, Adams Paul D, Nogales Eva

机构信息

California Institute for Quantitative Biology (QB3), University of California, Berkeley, California 94720, USA.

Molecular Biophysics and Integrative Bio-Imaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

出版信息

Nature. 2017 Sep 21;549(7672):414-417. doi: 10.1038/nature23903. Epub 2017 Sep 13.

DOI:10.1038/nature23903
PMID:28902838
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5844561/
Abstract

Human transcription factor IIH (TFIIH) is part of the general transcriptional machinery required by RNA polymerase II for the initiation of eukaryotic gene transcription. Composed of ten subunits that add up to a molecular mass of about 500 kDa, TFIIH is also essential for nucleotide excision repair. The seven-subunit TFIIH core complex formed by XPB, XPD, p62, p52, p44, p34, and p8 is competent for DNA repair, while the CDK-activating kinase subcomplex, which includes the kinase activity of CDK7 as well as the cyclin H and MAT1 subunits, is additionally required for transcription initiation. Mutations in the TFIIH subunits XPB, XPD, and p8 lead to severe premature ageing and cancer propensity in the genetic diseases xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy, highlighting the importance of TFIIH for cellular physiology. Here we present the cryo-electron microscopy structure of human TFIIH at 4.4 Å resolution. The structure reveals the molecular architecture of the TFIIH core complex, the detailed structures of its constituent XPB and XPD ATPases, and how the core and kinase subcomplexes of TFIIH are connected. Additionally, our structure provides insight into the conformational dynamics of TFIIH and the regulation of its activity.

摘要

人类转录因子IIH(TFIIH)是RNA聚合酶II启动真核基因转录所需的通用转录机制的一部分。TFIIH由十个亚基组成,总分子量约为500 kDa,对核苷酸切除修复也至关重要。由XPB、XPD、p62、p52、p44、p34和p8形成的七亚基TFIIH核心复合物具有DNA修复能力,而转录起始还需要包含CDK7激酶活性以及细胞周期蛋白H和MAT1亚基的CDK激活激酶亚复合物。TFIIH亚基XPB、XPD和p8的突变会导致色素性干皮病、科凯恩综合征和毛发硫营养不良等遗传性疾病出现严重早衰和癌症倾向,这突出了TFIIH对细胞生理学的重要性。在此,我们展示了分辨率为4.4 Å的人类TFIIH的冷冻电子显微镜结构。该结构揭示了TFIIH核心复合物的分子结构、其组成的XPB和XPD ATP酶的详细结构,以及TFIIH的核心和激酶亚复合物是如何连接的。此外,我们的结构还深入了解了TFIIH的构象动力学及其活性调节。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/224f04028ff8/nihms946403f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/e010954ac80a/nihms946403f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/ff0bcafeed43/nihms946403f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/cb7c9669fb5c/nihms946403f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/224f04028ff8/nihms946403f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/e010954ac80a/nihms946403f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/ff0bcafeed43/nihms946403f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/cb7c9669fb5c/nihms946403f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b2/5844561/224f04028ff8/nihms946403f4.jpg

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本文引用的文献

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Mediator structure and rearrangements required for holoenzyme formation.全酶形成所需的介质结构与重排。
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Double-stranded DNA translocase activity of transcription factor TFIIH and the mechanism of RNA polymerase II open complex formation.转录因子TFIIH的双链DNA转位酶活性及RNA聚合酶II开放复合物的形成机制。
Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):3961-6. doi: 10.1073/pnas.1417709112. Epub 2015 Mar 16.
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In TFIIH, XPD helicase is exclusively devoted to DNA repair.在转录因子IIH(TFIIH)中,XPD解旋酶专门负责DNA修复。
PLoS Biol. 2014 Sep 30;12(9):e1001954. doi: 10.1371/journal.pbio.1001954. eCollection 2014 Sep.
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Structural visualization of key steps in human transcription initiation.人类转录起始关键步骤的结构可视化。
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ARCH domain of XPD, an anchoring platform for CAK that conditions TFIIH DNA repair and transcription activities.XPD 的 ARCH 结构域,是 CAK 的锚定位点,调节 TFIIH 的 DNA 修复和转录活性。
Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):E633-42. doi: 10.1073/pnas.1213981110. Epub 2013 Feb 4.