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微阵列分析和检测与慢性血栓栓塞性肺动脉高压相关的 microRNAs。

Microarray Analysis and Detection of MicroRNAs Associated with Chronic Thromboembolic Pulmonary Hypertension.

机构信息

Department of Clinical Laboratory, Beijing Chao-Yang Hospital, Capital Medical University, Beijing 100020, China.

Key Laboratory of Respiratory and Pulmonary Circulation Disorders, Institute of Respiratory Medicine, Beijing 100020, China.

出版信息

Biomed Res Int. 2017;2017:8529796. doi: 10.1155/2017/8529796. Epub 2017 Aug 21.

Abstract

The aim of this study was to understand the importance of chronic thromboembolic pulmonary hypertension- (CTEPH-) associated microRNAs (miRNAs). miRNAs differentially expressed in CTEPH samples compared with control samples were identified, and the target genes were predicted. The target genes of the key differentially expressed miRNAs were analyzed, and functional enrichment analyses were carried out. Finally, the miRNAs were detected using RT-PCR. Among the downregulated miRNAs, MiR-3148 regulated the most target genes and was significantly enriched in pathways in cancer, glioma, and ErbB signaling pathway. Furthermore, the number of target genes coregulated by miR-3148 and other miRNAs was the most. AR (androgen receptor), a target gene of hsa-miR-3148, was enriched in pathways in cancer. PRKCA (Protein Kinase C Alpha), also a target gene of hsa-miR-3148, was enriched in 15 of 16 KEGG pathways, such as pathways in cancer, glioma, and ErbB signaling pathway. In addition, the RT-PCR results showed that the expression of hsa-miR-3148 in CTEPH samples was significantly lower than that in control samples ( < 0.01). MiR-3148 may play an important role in the development of CTEPH. The key mechanisms for this miRNA may be hsa-miR-3148-AR-pathways in cancer or hsa-miR-3148-PRKCA-pathways in cancer/glioma/ErbB signaling pathway.

摘要

本研究旨在探讨慢性血栓栓塞性肺动脉高压(CTEPH)相关 microRNAs(miRNAs)的重要性。与对照样本相比,鉴定出 CTEPH 样本中差异表达的 miRNAs,并预测其靶基因。分析关键差异表达 miRNAs 的靶基因,并进行功能富集分析。最后,采用 RT-PCR 检测 miRNAs。在下调的 miRNAs 中,MiR-3148 调控的靶基因最多,并且在癌症、神经胶质瘤和 ErbB 信号通路途径中显著富集。此外,miR-3148 与其他 miRNAs 共同调控的靶基因数量最多。AR(雄激素受体)是 hsa-miR-3148 的靶基因,在癌症途径中富集。PRKCA(蛋白激酶 C Alpha)也是 hsa-miR-3148 的靶基因,在 16 个 KEGG 途径中的 15 个中富集,如癌症、神经胶质瘤和 ErbB 信号通路途径。此外,RT-PCR 结果表明,CTEPH 样本中 hsa-miR-3148 的表达明显低于对照样本(<0.01)。MiR-3148 可能在 CTEPH 的发生发展中起重要作用。该 miRNA 的关键机制可能是 hsa-miR-3148-AR-癌症途径或 hsa-miR-3148-PRKCA-癌症/神经胶质瘤/ErbB 信号通路途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20e1/5585581/0c8e4adae252/BMRI2017-8529796.001.jpg

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