Xing Tingting, Liu Yongqin, Wang Ninglian, Xu Baiqing, Liu Keshao, Shen Liang, Gu Zhengquan, Guo Bixi, Zhou Yuguang, Liu Hongcan
Key Laboratory of Alpine Ecology and Biodiversity, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, PR China.
University of Chinese Academy of Sciences, Beijing, PR China.
Int J Syst Evol Microbiol. 2017 Oct;67(10):4235-4239. doi: 10.1099/ijsem.0.002290. Epub 2017 Sep 18.
A Gram-stain-negative, rod-shaped bacterial strain, designed RC4-10-4, belonging to the genus Erythrobacter, was isolated from the East Rongbuk Glacier on the Tibetan Plateau. Strain RC4-10-4 grew optimally at pH 7.0, at 25 °C and in the presence of 2 % (w/v) NaCl. Summed feature 3 (C16 : 1 ω6c and/or iso-C15 : 0 2-OH), summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c) and C16 : 0 were the major fatty acids. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, sphingoglycolipid and phosphatidylcholine. Carotenoid was detected in the cells. The DNA G+C content of the novel strain was 66.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain RC4-10-4 formed a distinct phylogenetic lineage within the cluster comprising Erythrobacter strains. Similarities between the 16S rRNA gene sequences of strain RC4-10-4 and the closely related strains Erythrobacter luteus KCTC 42179, Erythrobacter gangjinensis KCTC 22330, Erythrobacter odishensis KCTC 23981 and Erythrobacter atlanticuls KCTC 42697 were 98.0, 97.6, 97.5 and 97.2 %. The DNA-DNA hybridization values were 37.6, 15.4, 29.8 and 35.8 %, respectively. Based on the phenotypic and phylogenetic characteristics, strain RC4-10-4 represents a novel species of the genus Erythrobacter, for which the name Erythrobacter arachoides sp. nov. is proposed, with the type strain RC4-10-4 (=CGMCC 1.15507=JCM 31277).
从青藏高原东绒布冰川分离出一株革兰氏阴性、杆状细菌菌株,命名为RC4-10-4,属于红杆菌属。菌株RC4-10-4在pH 7.0、25 °C以及2 %(w/v)NaCl存在的条件下生长最佳。特征性总和3(C16 : 1 ω6c和/或异-C15 : 0 2-OH)、特征性总和8(C18 : 1 ω7c和/或C18 : 1 ω6c)以及C16 : 0是主要脂肪酸。主要极性脂质为磷脂酰乙醇胺、磷脂酰甘油、二磷脂酰甘油、鞘糖脂和磷脂酰胆碱。在细胞中检测到类胡萝卜素。该新菌株的DNA G+C含量为66.4 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株RC4-10-4在包含红杆菌属菌株的簇内形成了一个独特的系统发育谱系。菌株RC4-10-4与密切相关菌株红黄色红杆菌KCTC 42179、江陵红杆菌KCTC 22330、奥迪红杆菌KCTC 23981和大西洋红杆菌KCTC 42697的16S rRNA基因序列相似性分别为98.0%、97.6%、97.5% 和97.2%。DNA-DNA杂交值分别为37.6%、15.4%、29.8% 和35.8%。基于表型和系统发育特征,菌株RC4-10-4代表红杆菌属的一个新物种,为此提出名为蛛形红杆菌(Erythrobacter arachoides sp. nov.),模式菌株为RC4-10-4(=CGMCC 1.15507=JCM 31277)。