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诱导型 CRISPR 基因组编辑工具:分类与未来趋势。

Inducible CRISPR genome-editing tool: classifications and future trends.

机构信息

a National Engineering Laboratory for Cereal Fermentation Technology , Jiangnan University , Wuxi , China.

b The Key Laboratory of Industrial Biotechnology , Ministry of Education, School of Biotechnology, Jiangnan University , Wuxi , China.

出版信息

Crit Rev Biotechnol. 2018 Jun;38(4):573-586. doi: 10.1080/07388551.2017.1378999. Epub 2017 Sep 22.

Abstract

The discovery of CRISPR-Cas9/dCas9 system has reinforced our ability and revolutionized our history in genome engineering. While Cas9 and dCas9 are programed to modulate gene expression by introducing DNA breaks, blocking transcription factor recruitment or dragging functional groups towards the targeted sites, sgRNAs determine the genomic loci where the modulation occurs. The off-target problem, due to limited sgRNA specificity and genome complexity of many species, has posed concerns for the wide application of this revolutionary technique. To solve this problem and, more importantly, gain power over gene functionality and cell fate control, inducible strategies have been continuously evolved to offer tailored solutions to address specific biological questions. By reviewing recent advances in inducible CRISPR system design and critical elements potentially adding values to such systems, we classify current approaches in this domain into four mechanically distinct categories, namely, "split system", "allosteric system", "combinatorial system", and "transient delivery system", discuss the pros and cons of each system, and point out the under-explored areas and future directions, with the aim of enriching our toolbox of delicate life engineering.

摘要

CRISPR-Cas9/dCas9 系统的发现增强了我们的能力,并彻底改变了我们在基因组工程方面的历史。虽然 Cas9 和 dCas9 被编程为通过引入 DNA 断裂、阻断转录因子募集或将功能基团拖向靶向位点来调节基因表达,但 sgRNA 决定了发生调节的基因组位点。由于 sgRNA 特异性有限和许多物种的基因组复杂性,脱靶问题引起了人们对这项革命性技术广泛应用的关注。为了解决这个问题,更重要的是,要获得对基因功能和细胞命运控制的主动权,诱导策略不断发展,为解决特定的生物学问题提供定制的解决方案。通过回顾诱导型 CRISPR 系统设计的最新进展和可能为这些系统增加价值的关键要素,我们将该领域的当前方法分为四个机械上不同的类别,即“分裂系统”、“别构系统”、“组合系统”和“瞬时传递系统”,讨论每个系统的优缺点,并指出尚未充分探索的领域和未来方向,旨在丰富我们精细生命工程的工具包。

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