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细胞质中人类细胞的明显异常扩散:探针多分散性的影响。

Apparent Anomalous Diffusion in the Cytoplasm of Human Cells: The Effect of Probes' Polydispersity.

机构信息

Institute of Physical Chemistry, Polish Academy of Sciences , Kasprzaka 44/52, 01-224 Warsaw, Poland.

Nencki Institute of Experimental Biology of the Polish Academy of Sciences , 3 Pasteur Street, 02-093 Warsaw, Poland.

出版信息

J Phys Chem B. 2017 Oct 26;121(42):9831-9837. doi: 10.1021/acs.jpcb.7b07158. Epub 2017 Oct 13.

Abstract

This work, based on in vivo and in vitro measurements, as well as in silico simulations, provides a consistent analysis of diffusion of polydisperse nanoparticles in the cytoplasm of living cells. Using the example of fluorescence correlation spectroscopy (FCS), we show the effect of polydispersity of probes on the experimental results. Although individual probes undergo normal diffusion, in the ensemble of probes, an effective broadening of the distribution of diffusion times occurs-similar to anomalous diffusion. We introduced fluorescently labeled dextrans into the cytoplasm of HeLa cells and found that cytoplasmic hydrodynamic drag, exponentially dependent on probe size, extraordinarily broadens the distribution of diffusion times across the focal volume. As a result, the in vivo FCS data were effectively fitted with the anomalous subdiffusion model while for a monodisperse probe the normal diffusion model was most suitable. Diffusion time obtained from the anomalous diffusion model corresponds to a probe whose size is determined by the weight-average molecular weight of the polymer. The apparent anomaly exponent decreases with increasing polydispersity of the probes. Our results and methodology can be applied in intracellular studies of the mobility of nanoparticles, polymers, or oligomerizing proteins.

摘要

这项工作基于体内和体外测量以及计算机模拟,对多分散纳米粒子在活细胞细胞质中的扩散进行了一致的分析。我们以荧光相关光谱(FCS)为例,展示了探针多分散性对实验结果的影响。尽管单个探针经历正常扩散,但在探针的总体中,扩散时间的分布会出现有效展宽——类似于异常扩散。我们将荧光标记的葡聚糖引入 HeLa 细胞的细胞质中,发现细胞质流体动力学阻力与探针尺寸呈指数相关,极大地拓宽了整个焦域内扩散时间的分布。结果,体内 FCS 数据可以有效地用异常亚扩散模型拟合,而对于单分散探针,最合适的是正常扩散模型。从异常扩散模型中获得的扩散时间对应于一种探针,其尺寸由聚合物的重均分子量决定。表观异常指数随探针多分散性的增加而减小。我们的结果和方法可应用于纳米粒子、聚合物或寡聚化蛋白在细胞内迁移性的研究。

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