• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

电子态混合对视网膜发色团光异构化时间尺度的影响

Impact of Electronic State Mixing on the Photoisomerization Time Scale of the Retinal Chromophore.

作者信息

Manathunga Madushanka, Yang Xuchun, Orozco-Gonzalez Yoelvis, Olivucci Massimo

机构信息

Department of Chemistry, Bowling Green State University , Bowling Green, Ohio 43403, United States.

Institut de Physique et Chimie des Matériaux de Strasbourg, UMR 7504 Université de Strasbourg-CNRS, F-67034 Strasbourg, France.

出版信息

J Phys Chem Lett. 2017 Oct 19;8(20):5222-5227. doi: 10.1021/acs.jpclett.7b02344. Epub 2017 Oct 11.

DOI:10.1021/acs.jpclett.7b02344
PMID:28981285
Abstract

Spectral data show that the photoisomerization of retinal protonated Schiff base (rPSB) chromophores occurs on a 100 fs time scale or less in vertebrate rhodopsins, it is several times slower in microbial rhodopsins and it is between one and 2 orders of magnitude slower in solution. These time scale variations have been attributed to specific modifications of the topography of the first excited state potential energy surface of the chromophore. However, it is presently not clear which specific environment effects (e.g., electrostatic, electronic, or steric) are responsible for changing the surface topography. Here, we use QM/MM models and excited state trajectory computations to provide evidence for an increase in electronic mixing between the first and the second excited state of the chromophore when going from vertebrate rhodopsin to the solution environments. Ultimately, we argue that a correlation between the lifetime of the first excited state and electronic mixing between such state and its higher neighbor, may have been exploited to evolve rhodopsins toward faster isomerization and, possibly, light-sensitivity.

摘要

光谱数据表明,在脊椎动物视紫红质中,视黄醛质子化席夫碱(rPSB)发色团的光异构化发生在100飞秒或更短的时间尺度上,在微生物视紫红质中则慢几倍,而在溶液中则慢1至2个数量级。这些时间尺度的变化归因于发色团第一激发态势能面地形的特定改变。然而,目前尚不清楚是哪些特定的环境效应(如静电、电子或空间效应)导致了表面地形的变化。在这里,我们使用量子力学/分子力学(QM/MM)模型和激发态轨迹计算,来证明从脊椎动物视紫红质到溶液环境时,发色团第一激发态和第二激发态之间电子混合的增加。最终,我们认为第一激发态的寿命与该状态及其更高能级相邻态之间的电子混合之间的相关性,可能已被用于使视紫红质朝着更快的异构化以及可能的光敏感性方向进化。

相似文献

1
Impact of Electronic State Mixing on the Photoisomerization Time Scale of the Retinal Chromophore.电子态混合对视网膜发色团光异构化时间尺度的影响
J Phys Chem Lett. 2017 Oct 19;8(20):5222-5227. doi: 10.1021/acs.jpclett.7b02344. Epub 2017 Oct 11.
2
Intrinsic photoisomerization dynamics of protonated Schiff-base retinal.质子化席夫碱视黄醛的固有光致异构化动力学。
Nat Commun. 2019 Mar 14;10(1):1210. doi: 10.1038/s41467-019-09225-7.
3
Direct QM/MM excited-state dynamics of retinal protonated Schiff base in isolation and methanol solution.视网膜质子化席夫碱在孤立状态和甲醇溶液中的直接量子力学/分子力学激发态动力学。
J Phys Chem B. 2015 Jan 22;119(3):704-14. doi: 10.1021/jp5038798. Epub 2014 Sep 17.
4
Photoisomerization mechanism of 11-cis-locked artificial retinal chromophores: acceleration and primary photoproduct assignment.11-顺式锁定人工视网膜发色团的光异构化机制:加速与初级光产物归属
J Am Chem Soc. 2005 Mar 2;127(8):2433-42. doi: 10.1021/ja045747u.
5
Computational and Spectroscopic Characterization of the Photocycle of an Artificial Rhodopsin.一种人工视紫红质光循环的计算与光谱表征
J Phys Chem Lett. 2020 Jun 4;11(11):4245-4252. doi: 10.1021/acs.jpclett.0c00751. Epub 2020 May 13.
6
Molecular bases for the selection of the chromophore of animal rhodopsins.动物视紫红质发色团选择的分子基础。
Proc Natl Acad Sci U S A. 2015 Dec 15;112(50):15297-302. doi: 10.1073/pnas.1510262112. Epub 2015 Nov 25.
7
Barrierless Photoisomerization of 11-cis Retinal Protonated Schiff Base in Solution.溶液中 11-顺式视黄醛质子化席夫碱的无阻光异构化。
J Am Chem Soc. 2015 Oct 7;137(39):12434-7. doi: 10.1021/jacs.5b06492. Epub 2015 Sep 24.
8
Photoisomerization pathway of the microbial rhodopsin chromophore in solution.溶液中微生物视黄醛色素的光异构化途径。
Photochem Photobiol Sci. 2024 Aug;23(8):1435-1443. doi: 10.1007/s43630-024-00602-w. Epub 2024 Jun 17.
9
Photoisomerization efficiency in UV-absorbing visual pigments: protein-directed isomerization of an unprotonated retinal Schiff base.紫外线吸收视觉色素中的光异构化效率:未质子化视黄醛席夫碱的蛋白质导向异构化
Biochemistry. 2007 May 29;46(21):6437-45. doi: 10.1021/bi7003763. Epub 2007 May 3.
10
Control of Protonated Schiff Base Excited State Decay within Visual Protein Mimics: A Unified Model for Retinal Chromophores.质子化席夫碱激发态衰减的控制:视网膜色素的统一模型
Chemistry. 2021 Nov 25;27(66):16389-16400. doi: 10.1002/chem.202102383. Epub 2021 Oct 28.

引用本文的文献

1
Study of Photoselectivity in Linear Conjugated Chromophores Using the XMS-CASPT2 Method.使用XMS-CASPT2方法对线性共轭发色团中的光选择性进行研究。
ACS Phys Chem Au. 2024 Oct 2;4(6):736-749. doi: 10.1021/acsphyschemau.4c00065. eCollection 2024 Nov 27.
2
Understanding the Impact of Symmetrical Substitution on the Photodynamics of Sinapate Esters Using Gas-Phase Ultrafast Spectroscopy.利用气相超快光谱法理解对称取代对芥子酸酯光动力学的影响。
J Phys Chem Lett. 2023 Oct 5;14(39):8771-8779. doi: 10.1021/acs.jpclett.3c02134. Epub 2023 Sep 22.
3
Theoretical Study of the Photoisomerization Mechanism of All--Retinyl Acetate.
全反式视黄醛光致异构化机制的理论研究。
J Phys Chem A. 2021 Sep 30;125(38):8358-8372. doi: 10.1021/acs.jpca.1c05533. Epub 2021 Sep 21.
4
Quantum-Classical Simulation of Molecular Motors Driven Only by Light.仅由光驱动的分子马达的量子-经典模拟。
J Phys Chem Lett. 2021 Jun 17;12(23):5512-5518. doi: 10.1021/acs.jpclett.1c00951. Epub 2021 Jun 7.
5
Mechanism of Color and Photoacidity Tuning for the Protonated Green Fluorescent Protein Chromophore.质子化绿色荧光蛋白发色团的颜色和光酸可调谐机制。
J Am Chem Soc. 2020 Jun 24;142(25):11032-11041. doi: 10.1021/jacs.0c02796. Epub 2020 Jun 9.
6
Computational and Spectroscopic Characterization of the Photocycle of an Artificial Rhodopsin.一种人工视紫红质光循环的计算与光谱表征
J Phys Chem Lett. 2020 Jun 4;11(11):4245-4252. doi: 10.1021/acs.jpclett.0c00751. Epub 2020 May 13.
7
Excited-State Vibronic Dynamics of Bacteriorhodopsin from Two-Dimensional Electronic Photon Echo Spectroscopy and Multiconfigurational Quantum Chemistry.基于二维电子光子回波光谱和多组态量子化学的细菌视紫红质激发态振转动力学
J Phys Chem Lett. 2020 May 21;11(10):3889-3896. doi: 10.1021/acs.jpclett.0c01063. Epub 2020 May 4.
8
Multistate Multiconfiguration Quantum Chemical Computation of the Two-Photon Absorption Spectra of Bovine Rhodopsin.牛视紫红质双光子吸收光谱的多态多构型量子化学计算
J Phys Chem Lett. 2019 Oct 17;10(20):6293-6300. doi: 10.1021/acs.jpclett.9b02291. Epub 2019 Oct 3.
9
Fluorescence Enhancement of a Microbial Rhodopsin via Electronic Reprogramming.通过电子重编程增强微生物视紫红质的荧光。
J Am Chem Soc. 2019 Jan 9;141(1):262-271. doi: 10.1021/jacs.8b09311. Epub 2018 Dec 28.
10
Electronic State Mixing Controls the Photoreactivity of a Rhodopsin with all- trans Chromophore Analogues.电子态混合控制视紫红质与全反式发色团类似物的光反应活性。
J Phys Chem Lett. 2018 Nov 1;9(21):6350-6355. doi: 10.1021/acs.jpclett.8b02550. Epub 2018 Oct 23.