Laboratório de Biologia Evolutiva Teórica e Aplicada, Departamento de Genética, Universidade Federal do Rio de Janeiro, Brazil.
Molette Biology Laboratory for Environmental and Climate Change Studies, Department of Biological Sciences, Auburn University.
Genome Biol Evol. 2017 Oct 1;9(10):2580-2591. doi: 10.1093/gbe/evx181.
Animal tissues need to be properly oxygenated for carrying out catabolic respiration and, as such, natural selection has presumably favored special molecules that can reversibly bind and transport oxygen. Hemoglobins, hemocyanins, and hemerythrins (Hrs) fulfill this role, with Hrs being the least studied. Knowledge of oxygen-binding proteins is crucial for understanding animal physiology. Hr genes are present in the three domains of life, Archaea, Bacteria, and Eukaryota; however, within Animalia, Hrs has been reported only in marine species in six phyla (Annelida, Brachiopoda, Priapulida, Bryozoa, Cnidaria, and Arthropoda). Given this observed Hr distribution, whether all metazoan Hrs share a common origin is circumspect. We investigated Hr diversity and evolution in metazoans, by employing in silico approaches to survey for Hrs from of 120 metazoan transcriptomes and genomes. We found 58 candidate Hr genes actively transcribed in 36 species distributed in 11 animal phyla, with new records in Echinodermata, Hemichordata, Mollusca, Nemertea, Phoronida, and Platyhelminthes. Moreover, we found that "Hrs" reported from Cnidaria and Arthropoda were not consistent with that of other metazoan Hrs. Contrary to previous suggestions that Hr genes were absent in deuterostomes, we find Hr genes present in deuterostomes and were likely present in early bilaterians, but not in nonbilaterian animal lineages. As expected, the Hr gene tree did not mirror metazoan phylogeny, suggesting that Hrs evolutionary history was complex and besides the oxygen carrying capacity, the drivers of Hr evolution may also consist of secondary functional specializations of the proteins, like immunological functions.
动物组织需要适当的氧合才能进行分解代谢呼吸,因此,自然选择可能有利于能够可逆地结合和运输氧气的特殊分子。血红蛋白、血蓝蛋白和血红素(Hrs)发挥了这一作用,而 Hrs 的研究最少。对氧结合蛋白的了解对于理解动物生理学至关重要。Hr 基因存在于生命的三个领域,古菌、细菌和真核生物;然而,在动物界,Hrs 仅在六个门的海洋物种中被报道(环节动物门、腕足动物门、帚虫动物门、苔藓动物门、刺胞动物门和节肢动物门)。鉴于这种观察到的 Hr 分布,所有后生动物的 Hrs 是否具有共同的起源是值得怀疑的。我们通过采用计算方法从 120 种后生动物转录组和基因组中搜索 Hrs,研究了后生动物中 Hrs 的多样性和进化。我们在 36 个物种中发现了 58 个候选 Hr 基因,这些基因在 11 个动物门中活跃转录,在棘皮动物门、半索动物门、软体动物门、纽形动物门、磷虾门和扁形动物门中也有新的记录。此外,我们发现报道的刺胞动物门和节肢动物门的“Hrs”与其他后生动物的 Hrs 不一致。与之前关于 Hr 基因在后口动物中不存在的观点相反,我们发现后口动物中存在 Hr 基因,并且可能存在于早期的两侧对称动物中,但不存在于非两侧对称动物谱系中。正如预期的那样,Hr 基因树并没有反映后生动物的系统发育,这表明 Hrs 的进化历史很复杂,除了携带氧气的能力外,Hr 进化的驱动因素可能还包括蛋白质的次要功能特化,如免疫功能。