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肠炎沙门氏菌血清型森夫滕贝格070885及其芳樟醇适应突变体的基因组序列草图

Draft Genome Sequence of Serovar Senftenberg 070885 and Its Linalool-Adapted Mutant.

作者信息

Hollander Amit, Kalily Emmanuel, Shachar Dina, Yaron Sima, Danin-Poleg Yael

机构信息

Faculty of Biotechnology and Food Engineering, and the Russell Berrie Nanotechnology Institute, Technion-Israel Institute of Technology, Haifa, Israel.

Faculty of Biotechnology and Food Engineering, and the Russell Berrie Nanotechnology Institute, Technion-Israel Institute of Technology, Haifa, Israel

出版信息

Genome Announc. 2017 Oct 12;5(41):e01036-17. doi: 10.1128/genomeA.01036-17.

DOI:10.1128/genomeA.01036-17
PMID:29025934
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5637494/
Abstract

Here we report the genome sequences of both Senftenberg 070885, a clinical isolate from the 2007 outbreak linked to basil, and its mutant linalool-adapted  Senftenberg (LASS). These draft genomes of  Senftenberg may enable the identification of bacterial genes responsible for resistance to basil oil.

摘要

在此，我们报告了森夫滕贝格070885及其突变体适应芳樟醇的森夫滕贝格（LASS）的基因组序列，其中森夫滕贝格070885是一株与罗勒相关的2007年疫情的临床分离株。森夫滕贝格的这些基因组草图可能有助于鉴定对罗勒油具有抗性的细菌基因。

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Draft Genome Sequence of Serovar Senftenberg 070885 and Its Linalool-Adapted Mutant.肠炎沙门氏菌血清型森夫滕贝格070885及其芳樟醇适应突变体的基因组序列草图
Genome Announc. 2017 Oct 12;5(41):e01036-17. doi: 10.1128/genomeA.01036-17.
2
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本文引用的文献

1
Adaptation of Salmonella enterica Serovar Senftenberg to Linalool and Its Association with Antibiotic Resistance and Environmental Persistence.肠炎沙门氏菌斯坦弗伯格血清型对芳樟醇的适应性及其与抗生素抗性和环境持久性的关联
Appl Environ Microbiol. 2017 May 1;83(10). doi: 10.1128/AEM.03398-16. Print 2017 May 15.
2
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
3
Mechanisms of resistance to linalool in Salmonella Senftenberg and their role in survival on basil.肠炎沙门氏菌森夫滕贝格菌株对芳樟醇的抗性机制及其在罗勒上存活中的作用
Environ Microbiol. 2016 Nov;18(11):3673-3688. doi: 10.1111/1462-2920.13268. Epub 2016 Apr 6.
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Inexpensive multiplexed library preparation for megabase-sized genomes.用于兆碱基大小基因组的低成本多重文库制备。
PLoS One. 2015 May 22;10(5):e0128036. doi: 10.1371/journal.pone.0128036. eCollection 2015.
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Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures.囊性纤维化患者体内细菌病原体的遗传变异为选择压力提供了记录。
Nat Genet. 2014 Jan;46(1):82-7. doi: 10.1038/ng.2848. Epub 2013 Dec 8.
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Resistance to essential oils affects survival of Salmonella enterica serovars in growing and harvested basil.精油的抗药性影响生长和收获的罗勒中沙门氏菌血清型的存活。
Environ Microbiol. 2013 Oct;15(10):2787-98. doi: 10.1111/1462-2920.12139. Epub 2013 May 6.
7
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic：一个集成和可扩展的桌面软件平台，用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
8
Packed with Salmonella--investigation of an international outbreak of Salmonella Senftenberg infection linked to contamination of prepacked basil in 2007.携带沙门氏菌——2007年一起与预包装罗勒污染相关的国际沙门氏菌森夫滕贝格感染疫情调查
Foodborne Pathog Dis. 2008 Oct;5(5):661-8. doi: 10.1089/fpd.2008.0103.
9
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
10
Essential oils: their antibacterial properties and potential applications in foods--a review.精油：它们的抗菌特性及其在食品中的潜在应用——综述
Int J Food Microbiol. 2004 Aug 1;94(3):223-53. doi: 10.1016/j.ijfoodmicro.2004.03.022.