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创新的散射分析表明,疏水无序蛋白在水中会膨胀。

Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water.

作者信息

Riback Joshua A, Bowman Micayla A, Zmyslowski Adam M, Knoverek Catherine R, Jumper John M, Hinshaw James R, Kaye Emily B, Freed Karl F, Clark Patricia L, Sosnick Tobin R

机构信息

Graduate Program in Biophysical Sciences, University of Chicago, Chicago, IL 60637, USA.

Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.

出版信息

Science. 2017 Oct 13;358(6360):238-241. doi: 10.1126/science.aan5774.

Abstract

A substantial fraction of the proteome is intrinsically disordered, and even well-folded proteins adopt non-native geometries during synthesis, folding, transport, and turnover. Characterization of intrinsically disordered proteins (IDPs) is challenging, in part because of a lack of accurate physical models and the difficulty of interpreting experimental results. We have developed a general method to extract the dimensions and solvent quality (self-interactions) of IDPs from a single small-angle x-ray scattering measurement. We applied this procedure to a variety of IDPs and found that even IDPs with low net charge and high hydrophobicity remain highly expanded in water, contrary to the general expectation that protein-like sequences collapse in water. Our results suggest that the unfolded state of most foldable sequences is expanded; we conjecture that this property was selected by evolution to minimize misfolding and aggregation.

摘要

蛋白质组中有很大一部分是内在无序的,甚至折叠良好的蛋白质在合成、折叠、运输和周转过程中也会呈现非天然的几何形状。对内在无序蛋白质(IDP)进行表征具有挑战性,部分原因是缺乏精确的物理模型以及难以解释实验结果。我们开发了一种通用方法,可从单次小角X射线散射测量中提取IDP的尺寸和溶剂质量(自相互作用)。我们将此方法应用于多种IDP,发现即使是净电荷低且疏水性高的IDP在水中仍高度伸展,这与一般认为类似蛋白质序列在水中会折叠的预期相反。我们的结果表明,大多数可折叠序列的未折叠状态是伸展的;我们推测这种特性是通过进化选择而来,以尽量减少错误折叠和聚集。

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