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多步骤筛选阿尔茨海默病潜在遗传风险基因座的探索性结果在纵向 VITA 研究队列中。

Explorative results from multistep screening for potential genetic risk loci of Alzheimer's disease in the longitudinal VITA study cohort.

机构信息

Core Unit Systems Medicine, University Hospital of Würzburg, Würzburg, Germany.

Department of Psychiatry, Psychosomatics, Psychotherapy, University Hospital Frankfurt/Main, Frankfurt/Main, Germany.

出版信息

J Neural Transm (Vienna). 2018 Jan;125(1):77-87. doi: 10.1007/s00702-017-1796-6. Epub 2017 Oct 12.

Abstract

Alzheimer's disease (AD) is a neurodegenerative disorder that preferentially affects individuals of advanced age. Heritability estimates for AD range between 60 and 80%, but only few genetic risk factors have been identified so far. In the present explorative study, we aimed at characterizing the genetic contribution to late-onset AD in participants of the Vienna Transdanube Aging (VITA) longitudinal birth cohort study in a two-step approach. First, we performed a genome-wide screen of pooled DNA samples (n = 588) to identify allele frequency differences between AD patients and non-AD individuals using life-time diagnoses made at the age of 80 (t = 60 months). This analysis suggested a high proportion of brain-expressed genes required for cell adhesion, cell signaling and cell morphogenesis, and also scored in known AD risk genes. In a second step, we confirmed associations using individual genotypes of top-ranked markers examining AD diagnoses as well as the dimensional scores: FULD and MMSE determined up to the age of 82.5 (t = 90 months). Taken together, our study proposes genes ANKS1B, ENST00000414107, LOC100505811, SLC22A14, QRFPR, ZDHHC8P1, ADAMTS3 and PPFIA1 as possible new candidates involved in the etiology of late-onset AD, with further research being needed to clarify their exact roles.

摘要

阿尔茨海默病(AD)是一种神经退行性疾病,优先影响年龄较大的个体。AD 的遗传率估计在 60%到 80%之间,但迄今为止只确定了少数遗传风险因素。在本探索性研究中,我们旨在通过两步法来描述维也纳多瑙河老龄化(VITA)纵向出生队列研究参与者中晚期 AD 的遗传贡献。首先,我们对 pooled DNA 样本(n=588)进行了全基因组筛选,使用 80 岁时(t=60 个月)做出的终生诊断来鉴定 AD 患者和非 AD 个体之间的等位基因频率差异。该分析表明,需要大量参与细胞黏附、细胞信号转导和细胞形态发生的大脑表达基因,并且还在已知的 AD 风险基因中评分。在第二步中,我们使用排名最高的标记的个体基因型检查 AD 诊断以及维度评分:FULD 和 MMSE 确定到 82.5 岁(t=90 个月)。综上所述,我们的研究提出了 ANKS1B、ENST00000414107、LOC100505811、SLC22A14、QRFPR、ZDHHC8P1、ADAMTS3 和 PPFIA1 等基因作为可能涉及晚发性 AD 病因的新候选基因,需要进一步研究来澄清它们的确切作用。

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