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基于马氏距离的新型特征选择方法提高了早期肝细胞癌的单类分类。

Novel Mahalanobis-based feature selection improves one-class classification of early hepatocellular carcinoma.

机构信息

Biomedical Engineering Lab, Faculty of Electrical Engineering, Federal University of Uberlândia, Av. João Naves de Ávila 2121, Uberlândia, MG, 38408-100, Brazil.

Department of Radiology, General Hospital of Uberlândia, Federal University of Uberlândia, Av. Pará 1720, Uberlândia, MG, 38405-320, Brazil.

出版信息

Med Biol Eng Comput. 2018 May;56(5):817-832. doi: 10.1007/s11517-017-1736-5. Epub 2017 Oct 16.

DOI:10.1007/s11517-017-1736-5
PMID:29034407
Abstract

Detection of early hepatocellular carcinoma (HCC) is responsible for increasing survival rates in up to 40%. One-class classifiers can be used for modeling early HCC in multidetector computed tomography (MDCT), but demand the specific knowledge pertaining to the set of features that best describes the target class. Although the literature outlines several features for characterizing liver lesions, it is unclear which is most relevant for describing early HCC. In this paper, we introduce an unconstrained GA feature selection algorithm based on a multi-objective Mahalanobis fitness function to improve the classification performance for early HCC. We compared our approach to a constrained Mahalanobis function and two other unconstrained functions using Welch's t-test and Gaussian Data Descriptors. The performance of each fitness function was evaluated by cross-validating a one-class SVM. The results show that the proposed multi-objective Mahalanobis fitness function is capable of significantly reducing data dimensionality (96.4%) and improving one-class classification of early HCC (0.84 AUC). Furthermore, the results provide strong evidence that intensity features extracted at the arterial to portal and arterial to equilibrium phases are important for classifying early HCC.

摘要

检测早期肝细胞癌 (HCC) 可使生存率提高高达 40%。单类分类器可用于对多排螺旋 CT (MDCT) 中的早期 HCC 进行建模,但需要特定的知识来确定最能描述目标类的特征集。尽管文献中概述了几种用于描述肝脏病变的特征,但尚不清楚哪些特征对描述早期 HCC 最相关。在本文中,我们引入了一种基于多目标 Mahalanobis 适应度函数的无约束 GA 特征选择算法,以提高早期 HCC 的分类性能。我们通过 Welch 检验和高斯数据描述符将我们的方法与受约束的 Mahalanobis 函数和另外两种无约束函数进行了比较。通过对一类 SVM 进行交叉验证,评估了每个适应度函数的性能。结果表明,所提出的多目标 Mahalanobis 适应度函数能够显著降低数据维度 (96.4%),并提高早期 HCC 的一类分类 (0.84 AUC)。此外,结果还提供了强有力的证据,表明在动脉期到门静脉期和动脉期到平衡期提取的强度特征对分类早期 HCC 很重要。

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本文引用的文献

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Hepatocellular Carcinoma Surveillance: Moving Forward or Looking in the Rear-View Mirror?肝细胞癌监测:是向前迈进还是后视镜回望?
Am J Gastroenterol. 2015 Nov;110(11):1625. doi: 10.1038/ajg.2015.329.
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Computer-aided focal liver lesion detection.计算机辅助肝脏局灶性病变检测。
Int J Comput Assist Radiol Surg. 2013 Jul;8(4):511-25. doi: 10.1007/s11548-013-0832-8. Epub 2013 Mar 31.
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Noninvasive diagnostic criteria for hepatocellular carcinoma.肝细胞癌的非侵入性诊断标准。
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Channel selection and classification of electroencephalogram signals: an artificial neural network and genetic algorithm-based approach.脑电信号的通道选择与分类:基于人工神经网络和遗传算法的方法。
Artif Intell Med. 2012 Jun;55(2):117-26. doi: 10.1016/j.artmed.2012.02.001. Epub 2012 Apr 12.
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Management of hepatocellular carcinoma: an update.肝细胞癌的管理:最新进展
Hepatology. 2011 Mar;53(3):1020-2. doi: 10.1002/hep.24199.
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Liver tumors segmentation from CTA images using voxels classification and affinity constraint propagation.基于体素分类和亲和约束传播的 CTA 图像肝脏肿瘤分割。
Int J Comput Assist Radiol Surg. 2011 Mar;6(2):247-55. doi: 10.1007/s11548-010-0497-5. Epub 2010 Jun 24.
7
Information loss of the mahalanobis distance in high dimensions: application to feature selection.高维情况下马氏距离的信息丢失:在特征选择中的应用。
IEEE Trans Pattern Anal Mach Intell. 2009 Dec;31(12):2275-81. doi: 10.1109/TPAMI.2009.84.
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Performance of five two-sample location tests for skewed distributions with unequal variances.五种用于具有不等方差的偏态分布的两样本位置检验的性能。
Contemp Clin Trials. 2009 Sep;30(5):490-6. doi: 10.1016/j.cct.2009.06.007. Epub 2009 Jul 2.
9
Quantitative CT color mapping of the arterial enhancement fraction of the liver to detect hepatocellular carcinoma.肝脏动脉强化分数的定量CT彩色成像用于检测肝细胞癌。
Radiology. 2009 Feb;250(2):425-434. doi: 10.1148/radiol.2501072196.
10
Differential diagnosis of CT focal liver lesions using texture features, feature selection and ensemble driven classifiers.利用纹理特征、特征选择和集成驱动分类器对肝脏CT局灶性病变进行鉴别诊断。
Artif Intell Med. 2007 Sep;41(1):25-37. doi: 10.1016/j.artmed.2007.05.002. Epub 2007 Jul 12.