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从住院患者和污水处理厂分离出的耐碳青霉烯类铜绿假单胞菌基因型之间的重叠度较低。

Low overlap between carbapenem resistant Pseudomonas aeruginosa genotypes isolated from hospitalized patients and wastewater treatment plants.

作者信息

Golle Andrej, Janezic Sandra, Rupnik Maja

机构信息

National Laboratory for Health, Environment and Food, Maribor, Slovenia.

University of Maribor, Faculty of Medicine, Maribor, Slovenia.

出版信息

PLoS One. 2017 Oct 19;12(10):e0186736. doi: 10.1371/journal.pone.0186736. eCollection 2017.

Abstract

The variability of carbapenem-resistant Pseudomonas aeruginosa strains (CRPA) isolated from urine and respiratory samples in a large microbiological laboratory, serving several health care settings, and from effluents of two wastewater treatment plants (WWTP) from the same region was assessed by PFGE typing and by resistance to 10 antibiotics. During the 12-month period altogether 213 carbapenem-resistant P. aeruginosa isolates were cultured and distributed into 65 pulsotypes and ten resistance profiles. For representatives of all 65 pulsotypes 49 different MLSTs were determined. Variability of clinical and environmental strains was comparable, 130 carbapenem-resistant P. aeruginosa obtained from 109 patients were distributed into 38 pulsotypes, while 83 isolates from WWTPs were classified into 31 pulsotypes. Only 9 pulsotypes were shared between two or more settings (hospital or WWTP). Ten MLST were determined for those prevalent pulsotypes, two of them (ST111 and ST235) are among most successful CRPA types worldwide. Clinical and environmental carbapenem-resistant P. aeruginosa strains differed in antibiotic resistance. The highest proportion of clinical isolates was resistant to piperacillin/tazobactam (52.3%) and ceftazidime (42.3%). The highest proportion of environmental isolates was resistant to ceftazidime (37.1%) and ciprofloxacin (35.5%). The majority of isolates was resistant only to imipenem and/or meropenem. Strains with additional resistances were distributed into nine different patterns. All of them included clinically relevant strains, while environmental strains showed only four additional different patterns.

摘要

在一家服务于多个医疗机构的大型微生物实验室中,对从尿液和呼吸道样本中分离出的耐碳青霉烯类铜绿假单胞菌菌株(CRPA)以及来自同一地区两家污水处理厂(WWTP)的废水样本中的此类菌株进行了评估,评估方法包括脉冲场凝胶电泳(PFGE)分型以及对10种抗生素的耐药性检测。在为期12个月的时间里,共培养出213株耐碳青霉烯类铜绿假单胞菌菌株,这些菌株被分为65个脉冲型和10种耐药谱型。对所有65个脉冲型的代表菌株确定了49种不同的多位点序列分型(MLST)。临床菌株和环境菌株的变异性相当,从109名患者中获得的130株耐碳青霉烯类铜绿假单胞菌被分为38个脉冲型,而来自污水处理厂的83株菌株被分为31个脉冲型。只有9个脉冲型在两个或更多场所(医院或污水处理厂)中出现。对那些流行的脉冲型确定了10种MLST,其中两种(ST111和ST235)是全球最常见的耐碳青霉烯类铜绿假单胞菌类型。临床和环境来源的耐碳青霉烯类铜绿假单胞菌菌株在抗生素耐药性方面存在差异。临床分离株中对哌拉西林/他唑巴坦耐药的比例最高(52.3%),对头孢他啶耐药的比例次之(42.3%)。环境分离株中对头孢他啶耐药的比例最高(37.1%),对环丙沙星耐药的比例次之(35.5%)。大多数分离株仅对亚胺培南和/或美罗培南耐药。具有额外耐药性的菌株被分为9种不同模式。所有这些模式中都包含临床相关菌株,而环境菌株仅显示出另外4种不同模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf48/5648238/690ab78e18ee/pone.0186736.g001.jpg

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