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基于18S核糖体DNA对环线虫总科分类的研究视角

An 18S rDNA Perspective on the Classification of Criconematoidea.

作者信息

Powers Thomas, Harris Timothy, Higgins Rebecca, Mullin Peter, Powers Kirsten

机构信息

University of Nebraska-Lincoln, Lincoln, NE 68583-0722.

出版信息

J Nematol. 2017 Sep;49(3):236-244.

Abstract

In the nematode family Criconematidae, a taxonomy primarily based on cuticle characters has created classifications that are notoriously volatile. Molecular characters may lead to their stabilization. A phylogenetic tree of Criconematoidea was constructed using 166 new near full-length 18S rDNA sequences and 58 sequences from GenBank. Bayesian and maximum likelihood (ML) analyses produced trees with similar topologies. Major features include a strongly supported clade that includes Criconematidae and Hemicycliophoridae, excluding Paratylenchidae and Tylenchulidae. Another well-supported clade groups , , , and plus , combining nematodes with cuticular scales with those without scales at any life stage. , , , and are recognized as monophyletic groups, but is paraphyletic. Both trees support an unexpected sister relationship between and . The 18S rDNA dataset was insufficient for distinguishing genus boundaries between , , and . The relationships depicted by the 18S rDNA phylogeny suggest that key morphological characters used in the classification of Criconematidae are not homologous.

摘要

在环线虫科中,一个主要基于角质层特征的分类系统产生了出了名不稳定的分类。分子特征可能会使其稳定下来。利用166条新的近全长18S rDNA序列和来自GenBank的58条序列构建了环线虫总科的系统发育树。贝叶斯分析和最大似然法(ML)分析产生了拓扑结构相似的树。主要特征包括一个得到有力支持的分支,其中包括环线虫科和半轮线虫科,不包括矮化线虫科和短体线虫科。另一个得到充分支持的分支将[此处原文缺失部分属名]、[此处原文缺失部分属名]、[此处原文缺失部分属名]和[此处原文缺失部分属名]以及[此处原文缺失部分属名]组合在一起,将在任何生命阶段具有角质层鳞片的线虫与没有鳞片的线虫归为一类。[此处原文缺失部分属名]、[此处原文缺失部分属名]、[此处原文缺失部分属名]和[此处原文缺失部分属名]被认为是单系类群,但[此处原文缺失部分属名]是并系的。两棵树都支持[此处原文缺失部分属名]和[此处原文缺失部分属名]之间意外的姐妹关系。18S rDNA数据集不足以区分[此处原文缺失部分属名]、[此处原文缺失部分属名]和[此处原文缺失部分属名]之间的属界。18S rDNA系统发育所描绘的关系表明,环线虫科分类中使用的关键形态特征并非同源。

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