Eifan Saleh A, Nour Islam, Hanif Atif, Zamzam Abdelrahman M M, AlJohani Sameera Mohammed
Botany and Microbiology Department, Faculty of Science, King Saud University, Riyadh, Saudi Arabia.
Basic Medical Science Department, Inaya Medical Sciences College, Riyadh, Saudi Arabia.
Saudi J Biol Sci. 2017 Nov;24(7):1631-1638. doi: 10.1016/j.sjbs.2017.06.001. Epub 2017 Jun 6.
Since the initial emergence of Middle East respiratory syndrome coronavirus (MERS-CoV) in 2012, a high incidence rate has been observed in Saudi Arabia. This suggests that the country is at continuous risk. The epidemic level of MERS-CoV infection was examined in Saudi Arabia by the Susceptible-Infectious-Recovered (SIR) model using a Bayesian approach for estimation of time dependent reproduction number (R) across a two-year interval (May, 2013-May, 2015) in five defined clusters, followed by sensitivity analysis of the most significant clusters. Significant MERS-CoV peaks were detected in the period between March and May of each year. Moreover, MERS-CoV infection was highlighted in western (40.8%) and central (31.9%) regions, followed by eastern region (20%). The temporal-based Bayesian approach indicated a sub-critical epidemic in all regions in the baseline scenario (R: 0.85-0.97). However, R potential limit was exceeded in the sensitivity analysis scenario in only central and western regions (R: 1.08-1.12) that denoted epidemic level in those regions. The impact of sporadic cases was found relatively insignificant and pinpointed to the lack of zoonotic influence on MERS-CoV transmission dynamics. The results of current study would be helpful for evaluation of future progression of MERS-CoV infections, better understanding and control interventions.
自2012年中东呼吸综合征冠状病毒(MERS-CoV)首次出现以来,沙特阿拉伯的发病率一直很高。这表明该国持续面临风险。采用易感-感染-康复(SIR)模型,通过贝叶斯方法估计2013年5月至2015年5月两年间五个特定集群中随时间变化的繁殖数(R),对沙特阿拉伯MERS-CoV感染的流行水平进行了研究,随后对最重要的集群进行了敏感性分析。在每年3月至5月期间检测到明显的MERS-CoV高峰。此外,MERS-CoV感染在西部地区(40.8%)和中部地区(31.9%)最为突出,其次是东部地区(20%)。基于时间的贝叶斯方法表明,在基线情景下所有地区均处于亚临界流行状态(R:0.85-0.97)。然而,在敏感性分析情景中,仅中部和西部地区超过了R的潜在极限(R:1.08-1.12),这表明这些地区处于流行水平。发现散发病例的影响相对较小,并指出人畜共患病对MERS-CoV传播动态缺乏影响。本研究结果将有助于评估MERS-CoV感染的未来进展,更好地理解和控制干预措施。