Department of Biology, Portland State University.
Department of Integrative Biology, Oregon State University.
Genome Biol Evol. 2017 Nov 1;9(11):3008-3022. doi: 10.1093/gbe/evx222.
A mutation-accumulation (MA) experiment with Caenorhabditis elegans nematodes was conducted in which replicate, independently evolving lines were initiated from a low-fitness mitochondrial electron transport chain mutant, gas-1. The original intent of the study was to assess the effect of electron transport chain dysfunction involving elevated reactive oxygen species production on patterns of spontaneous germline mutation. In contrast to results of standard MA experiments, gas-1 MA lines evolved slightly higher mean fitness alongside reduced among-line genetic variance compared with their ancestor. Likewise, the gas-1 MA lines experienced partial recovery to wildtype reactive oxygen species levels. Whole-genome sequencing and analysis revealed that the molecular spectrum but not the overall rate of nuclear DNA mutation differed from wildtype patterns. Further analysis revealed an enrichment of mutations in loci that occur in a gas-1-centric region of the C. elegans interactome, and could be classified into a small number of functional-genomic categories. Characterization of a backcrossed four-mutation set isolated from one gas-1 MA line revealed this combination to be beneficial on both gas-1 mutant and wildtype genetic backgrounds. Our combined results suggest that selection favoring beneficial mutations can be powerful even under unfavorable population genetic conditions, and agree with fitness landscape theory predicting an inverse relationship between population fitness and the likelihood of adaptation.
利用秀丽隐杆线虫进行了一个突变积累(MA)实验,其中从一个低适应度的线粒体电子传递链突变体 gas-1 开始,产生了多个独立进化的复制系。该研究的最初目的是评估涉及活性氧(ROS)产生增加的电子传递链功能障碍对自发生殖系突变模式的影响。与标准 MA 实验的结果相反,与祖先相比,gas-1 MA 系的平均适应度略有提高,而遗传变异的系间差异降低。同样,gas-1 MA 系经历了部分恢复到野生型 ROS 水平。全基因组测序和分析表明,核 DNA 突变的分子谱而不是总体突变率与野生型模式不同。进一步的分析显示,在发生在秀丽隐杆线虫相互作用体以 gas-1 为中心的区域中的基因座中,突变富集,并且可以分为少数几个功能基因组类别。从一个 gas-1 MA 系中分离出的回交四突变体的特征表明,这种组合在 gas-1 突变体和野生型遗传背景下都是有益的。我们的综合结果表明,即使在不利的群体遗传条件下,有利于有利突变的选择也可能是强大的,并且与适应度景观理论一致,该理论预测种群适应度与适应的可能性之间存在反比关系。