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氧化应激下 Caenorhabditis elegans 中极端遗传漂变下的适应性进化。

Adaptive Evolution under Extreme Genetic Drift in Oxidatively Stressed Caenorhabditis elegans.

机构信息

Department of Biology, Portland State University.

Department of Integrative Biology, Oregon State University.

出版信息

Genome Biol Evol. 2017 Nov 1;9(11):3008-3022. doi: 10.1093/gbe/evx222.

DOI:10.1093/gbe/evx222
PMID:29069345
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5714194/
Abstract

A mutation-accumulation (MA) experiment with Caenorhabditis elegans nematodes was conducted in which replicate, independently evolving lines were initiated from a low-fitness mitochondrial electron transport chain mutant, gas-1. The original intent of the study was to assess the effect of electron transport chain dysfunction involving elevated reactive oxygen species production on patterns of spontaneous germline mutation. In contrast to results of standard MA experiments, gas-1 MA lines evolved slightly higher mean fitness alongside reduced among-line genetic variance compared with their ancestor. Likewise, the gas-1 MA lines experienced partial recovery to wildtype reactive oxygen species levels. Whole-genome sequencing and analysis revealed that the molecular spectrum but not the overall rate of nuclear DNA mutation differed from wildtype patterns. Further analysis revealed an enrichment of mutations in loci that occur in a gas-1-centric region of the C. elegans interactome, and could be classified into a small number of functional-genomic categories. Characterization of a backcrossed four-mutation set isolated from one gas-1 MA line revealed this combination to be beneficial on both gas-1 mutant and wildtype genetic backgrounds. Our combined results suggest that selection favoring beneficial mutations can be powerful even under unfavorable population genetic conditions, and agree with fitness landscape theory predicting an inverse relationship between population fitness and the likelihood of adaptation.

摘要

利用秀丽隐杆线虫进行了一个突变积累(MA)实验,其中从一个低适应度的线粒体电子传递链突变体 gas-1 开始,产生了多个独立进化的复制系。该研究的最初目的是评估涉及活性氧(ROS)产生增加的电子传递链功能障碍对自发生殖系突变模式的影响。与标准 MA 实验的结果相反,与祖先相比,gas-1 MA 系的平均适应度略有提高,而遗传变异的系间差异降低。同样,gas-1 MA 系经历了部分恢复到野生型 ROS 水平。全基因组测序和分析表明,核 DNA 突变的分子谱而不是总体突变率与野生型模式不同。进一步的分析显示,在发生在秀丽隐杆线虫相互作用体以 gas-1 为中心的区域中的基因座中,突变富集,并且可以分为少数几个功能基因组类别。从一个 gas-1 MA 系中分离出的回交四突变体的特征表明,这种组合在 gas-1 突变体和野生型遗传背景下都是有益的。我们的综合结果表明,即使在不利的群体遗传条件下,有利于有利突变的选择也可能是强大的,并且与适应度景观理论一致,该理论预测种群适应度与适应的可能性之间存在反比关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/ec07d89659cb/evx222f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/fcd8df23c26f/evx222f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/e6bfb152245c/evx222f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/37153f0dae94/evx222f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/ec07d89659cb/evx222f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/fcd8df23c26f/evx222f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/e6bfb152245c/evx222f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/37153f0dae94/evx222f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c717/5714194/ec07d89659cb/evx222f4.jpg

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本文引用的文献

1
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Genetics. 2017 Jun;206(2):691-716. doi: 10.1534/genetics.115.186288.
2
RISK OF POPULATION EXTINCTION FROM FIXATION OF NEW DELETERIOUS MUTATIONS.新的有害突变固定导致种群灭绝的风险。
Evolution. 1994 Oct;48(5):1460-1469. doi: 10.1111/j.1558-5646.1994.tb02188.x.
3
PERSPECTIVE: SPONTANEOUS DELETERIOUS MUTATION.观点:自发有害突变
哺乳动物中线粒体与核基因组协同进化的基因组特征。
Mol Biol Evol. 2022 Nov 3;39(11). doi: 10.1093/molbev/msac233.
4
Mitonuclear Mismatch is Associated With Increased Male Frequency, Outcrossing, and Male Sperm Size in Experimentally-Evolved .在实验进化中,线粒体-细胞核不匹配与雄性频率增加、异交以及雄性精子大小增大有关。
Front Genet. 2022 Mar 11;13:742272. doi: 10.3389/fgene.2022.742272. eCollection 2022.
5
Genetic hitchhiking, mitonuclear coadaptation, and the origins of mt DNA barcode gaps.遗传搭便车、线粒体-细胞核共适应与线粒体DNA条形码间隙的起源
Ecol Evol. 2020 Aug 3;10(17):9048-9059. doi: 10.1002/ece3.6640. eCollection 2020 Sep.
6
Mitochondrial DNA Variation and Selfish Propagation Following Experimental Bottlenecking in Two Distantly Related Isolates.线粒体 DNA 变异与两个远缘隔离种群经历瓶颈效应后的自私繁殖
Genes (Basel). 2020 Jan 10;11(1):77. doi: 10.3390/genes11010077.
7
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Genetics. 2019 Mar;211(3):1045-1058. doi: 10.1534/genetics.119.301935. Epub 2019 Jan 22.
8
Experimental evidence that thermal selection shapes mitochondrial genome evolution.实验证据表明,热选择塑造了线粒体基因组的进化。
Sci Rep. 2018 Jun 22;8(1):9500. doi: 10.1038/s41598-018-27805-3.
Evolution. 1999 Jun;53(3):645-663. doi: 10.1111/j.1558-5646.1999.tb05361.x.
4
THE POPULATION GENETICS OF ADAPTATION: THE DISTRIBUTION OF FACTORS FIXED DURING ADAPTIVE EVOLUTION.适应性的群体遗传学:适应性进化过程中固定因子的分布
Evolution. 1998 Aug;52(4):935-949. doi: 10.1111/j.1558-5646.1998.tb01823.x.
5
The effect of induced mutations on quantitative traits in : Natural versus artificial conditions.诱导突变对数量性状的影响:自然条件与人工条件的比较
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8
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Heredity (Edinb). 2015 Dec;115(6):503-8. doi: 10.1038/hdy.2015.51. Epub 2015 Jun 24.
9
The fitness effect of mutations across environments: Fisher's geometrical model with multiple optima.跨环境突变的适合度效应:具有多个最优解的 Fisher 几何模型。
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