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真核生物mRNA 3'端加工机制的结构

Architecture of eukaryotic mRNA 3'-end processing machinery.

作者信息

Casañal Ana, Kumar Ananthanarayanan, Hill Chris H, Easter Ashley D, Emsley Paul, Degliesposti Gianluca, Gordiyenko Yuliya, Santhanam Balaji, Wolf Jana, Wiederhold Katrin, Dornan Gillian L, Skehel Mark, Robinson Carol V, Passmore Lori A

机构信息

MRC Laboratory of Molecular Biology, Cambridge, UK.

Chemistry Research Laboratory, University of Oxford, Oxford, UK.

出版信息

Science. 2017 Nov 24;358(6366):1056-1059. doi: 10.1126/science.aao6535. Epub 2017 Oct 26.

DOI:10.1126/science.aao6535
PMID:29074584
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5788269/
Abstract

Newly transcribed eukaryotic precursor messenger RNAs (pre-mRNAs) are processed at their 3' ends by the ~1-megadalton multiprotein cleavage and polyadenylation factor (CPF). CPF cleaves pre-mRNAs, adds a polyadenylate tail, and triggers transcription termination, but it is unclear how its various enzymes are coordinated and assembled. Here, we show that the nuclease, polymerase, and phosphatase activities of yeast CPF are organized into three modules. Using electron cryomicroscopy, we determined a 3.5-angstrom-resolution structure of the ~200-kilodalton polymerase module. This revealed four β propellers, in an assembly markedly similar to those of other protein complexes that bind nucleic acid. Combined with in vitro reconstitution experiments, our data show that the polymerase module brings together factors required for specific and efficient polyadenylation, to help coordinate mRNA 3'-end processing.

摘要

新转录的真核生物前体信使核糖核酸(前体mRNA)在其3'端由约1兆道尔顿的多蛋白切割和聚腺苷酸化因子(CPF)进行加工。CPF切割前体mRNA,添加聚腺苷酸尾巴,并触发转录终止,但目前尚不清楚其各种酶是如何协调和组装的。在这里,我们表明酵母CPF的核酸酶、聚合酶和磷酸酶活性被组织成三个模块。使用电子冷冻显微镜,我们确定了约200千道尔顿聚合酶模块的3.5埃分辨率结构。这揭示了四个β螺旋桨,其组装与其他结合核酸的蛋白质复合物的组装明显相似。结合体外重组实验,我们的数据表明聚合酶模块汇集了特异性和高效聚腺苷酸化所需的因子,以帮助协调mRNA 3'端加工。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/24f0298900f7/Science-358-1056-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/a80b0f2159c0/Science-358-1056-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/064f4bd31c4e/Science-358-1056-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/ad3904c81d72/Science-358-1056-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/24f0298900f7/Science-358-1056-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/a80b0f2159c0/Science-358-1056-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/064f4bd31c4e/Science-358-1056-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/ad3904c81d72/Science-358-1056-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67b7/6516196/24f0298900f7/Science-358-1056-g004.jpg

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2
Structure of a yeast activated spliceosome at 3.5 Å resolution.酵母激活剪接体的 3.5Å 分辨率结构。
Science. 2016 Aug 26;353(6302):904-11. doi: 10.1126/science.aag0291. Epub 2016 Jul 21.
3
Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33.
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Nucleic Acids Res. 2025 Jan 24;53(3). doi: 10.1093/nar/gkaf060.
4
Coupling of alternative splicing and alternative polyadenylation.可变剪接与可变聚腺苷酸化的偶联
Acta Biochim Biophys Sin (Shanghai). 2024 Dec 3;57(1):22-32. doi: 10.3724/abbs.2024211.
5
The PNUTS phosphatase complex controls transcription pause release.PNUTS磷酸酶复合体控制转录暂停释放。
Mol Cell. 2024 Dec 19;84(24):4843-4861.e8. doi: 10.1016/j.molcel.2024.10.045. Epub 2024 Nov 26.
6
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7
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9
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