从含砷金矿中分离出的抗砷[具体菌种名]菌株SZ1的基因组序列草图
Draft Genome Sequence of Arsenic-Resistant sp. Strain SZ1 Isolated from Arsenic-Bearing Gold Ores.
作者信息
Mohd Bahari Zaratulnur, Ibrahim Zaharah, Jaafar Jafariah, Shahir Shafinaz
机构信息
Department of Biosciences and Health Sciences, Faculty of Biosciences and Medical Engineering, Universiti Teknologi Malaysia, Skudai, Johor, Malaysia.
Department of Chemistry, Faculty of Science, Universiti Teknologi Malaysia, Skudai, Johor, Malaysia.
出版信息
Genome Announc. 2017 Oct 26;5(43):e01183-17. doi: 10.1128/genomeA.01183-17.
Abstract
sp. strain SZ1 isolated from gold ores of a Malaysia gold mine was found to be highly resistant to arsenic. Here, we report the draft genome sequence of SZ1, which may provide further insights into understanding its arsenic resistance mechanism. In this draft genome, a complete set of operons and two additional scattered genes were encoded.
摘要
从马来西亚某金矿的金矿矿石中分离出的sp.菌株SZ1被发现对砷具有高度抗性。在此，我们报告SZ1的基因组草图序列，这可能为深入了解其抗砷机制提供进一步的见解。在这个基因组草图中，编码了一套完整的操纵子和另外两个分散的基因。
相似文献
1
Draft Genome Sequence of Arsenic-Resistant sp. Strain SZ1 Isolated from Arsenic-Bearing Gold Ores.从含砷金矿中分离出的抗砷[具体菌种名]菌株SZ1的基因组序列草图
Genome Announc. 2017 Oct 26;5(43):e01183-17. doi: 10.1128/genomeA.01183-17.
2
Draft Genome Sequence of sp. Strain CDB3, an Arsenic-Resistant Soil Bacterium Isolated from Cattle Dip Sites.从牛浸洗场分离出的抗砷土壤细菌菌株CDB3的基因组序列草图
Genome Announc. 2017 Jun 22;5(25):e00429-17. doi: 10.1128/genomeA.00429-17.
3
Draft Genome Sequence of Pseudarthrobacter sp. Strain AG30, Isolated from a Gold and Copper Mine in China.从中国一座金铜矿分离出的假节杆菌属菌株AG30的基因组序列草图
Microbiol Resour Announc. 2018 Nov 1;7(17). doi: 10.1128/MRA.01329-18. eCollection 2018 Nov.
4
Draft Genome Sequence of Nitrincola sp. Strain A-D6, an Arsenic-Resistant Gammaproteobacterium Isolated from a Salt Flat.从盐沼分离出的抗砷γ-变形菌盐硝弧菌属菌株A-D6的基因组序列草图
Genome Announc. 2014 Nov 20;2(6):e01144-14. doi: 10.1128/genomeA.01144-14.
5
Draft Genome Sequence of Anaeromyxobacter sp. Strain PSR-1, an Arsenate-Respiring Bacterium Isolated from Arsenic-Contaminated Soil.厌氧粘细菌属菌株PSR-1的基因组草图序列，该菌株是从砷污染土壤中分离出的一种砷呼吸细菌。
Genome Announc. 2015 May 14;3(3):e00472-15. doi: 10.1128/genomeA.00472-15.
6
Draft Genome Sequence of Brevibacterium linens AE038-8, an Extremely Arsenic-Resistant Bacterium.极端抗砷细菌亚麻短杆菌AE038-8的基因组序列草图
Genome Announc. 2015 Apr 16;3(2):e00316-15. doi: 10.1128/genomeA.00316-15.
7
Genomic and Biotechnological Characterization of the Heavy-Metal Resistant, Arsenic-Oxidizing Bacterium Ensifer sp. M14.重金属抗性、砷氧化细菌Ensifer sp. M14的基因组和生物技术特性分析
Genes (Basel). 2018 Jul 27;9(8):379. doi: 10.3390/genes9080379.
8
Draft Genome Sequence of Ochrobactrum pseudogrignonense Strain CDB2, a Highly Efficient Arsenate-Resistant Soil Bacterium from Arsenic-Contaminated Cattle Dip Sites.来自砷污染牛浸液场地的高效抗砷酸盐土壤细菌——假格里尼翁苍白杆菌菌株CDB2的基因组序列草图
Genome Announc. 2013 Apr 18;1(2):e0017313. doi: 10.1128/genomeA.00173-13.
9
Draft genome sequence of sp. strain B6 isolated from the high-arsenic sediments in Datong Basin, China.从中国大同盆地高砷沉积物中分离出的sp.菌株B6的基因组序列草图。
Stand Genomic Sci. 2017 Jan 23;12:11. doi: 10.1186/s40793-017-0231-9. eCollection 2017.
10
Efficient arsenate reduction by As-resistant bacterium Bacillus sp. strain PVR-YHB1-1: Characterization and genome analysis.耐砷菌 Bacillus sp. 菌株 PVR-YHB1-1 高效还原砷酸盐：特性与基因组分析。
Chemosphere. 2019 Mar;218:1061-1070. doi: 10.1016/j.chemosphere.2018.11.145. Epub 2018 Nov 23.
引用本文的文献
1
Histological and proteome analyses of -mediated decrease in arsenic toxicity in .介导的[具体对象]中砷毒性降低的组织学和蛋白质组分析。 （注：原文中“-mediated”和“in.”部分信息不完整，翻译可能不太准确，需结合完整准确的原文进一步完善。）
3 Biotech. 2021 Jul;11(7):336. doi: 10.1007/s13205-021-02864-y. Epub 2021 Jun 16.
本文引用的文献
1
Isolation and characterization of arsenic resistant Geobacillus kaustophilus strain from geothermal soils.从地热土壤中分离耐砷的高温好氧芽孢杆菌及其特性研究。
J Basic Microbiol. 2011 Aug;51(4):364-71. doi: 10.1002/jobm.201000314. Epub 2011 Mar 24.
2
Prodigal: prokaryotic gene recognition and translation initiation site identification.普罗迪格：原核基因识别和翻译起始位点鉴定。
BMC Bioinformatics. 2010 Mar 8;11:119. doi: 10.1186/1471-2105-11-119.
3
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
4
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer：核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
5
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.Blast2GO：功能基因组学研究中用于注释、可视化和分析的通用工具。
Bioinformatics. 2005 Sep 15;21(18):3674-6. doi: 10.1093/bioinformatics/bti610. Epub 2005 Aug 4.
6
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.用于检测tRNA和snoRNA的tRNAscan-SE、snoscan和snoGPS网络服务器。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366.
Zotero 插件