从中国一座金铜矿分离出的假节杆菌属菌株AG30的基因组序列草图
Draft Genome Sequence of Pseudarthrobacter sp. Strain AG30, Isolated from a Gold and Copper Mine in China.
作者信息
Ben Fekih Ibtissem, Ma Yuanjing, Herzberg Martin, Zhang Chengkang, Li Yuan Ping, Mazhar Sohaib H, Bello Suleiman Kehinde, Yang Nan, Su Junming, Xu Junqiang, Zhang Ruirui, Feng Renwei, Chen Zhengxian, Rensing Christopher
机构信息
Institute of Environmental Microbiology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, China.
College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, China.
出版信息
Microbiol Resour Announc. 2018 Nov 1;7(17). doi: 10.1128/MRA.01329-18. eCollection 2018 Nov.
Abstract
Here, we report the features and draft genome sequence of Pseudarthrobacter sp. strain AG30, isolated from the Zijin gold and copper mine in China. The genome size of Pseudarthrobacter sp. AG30 was 4,618,494 bp, with a G+C content of 66.2%. Interesting genes and operons putatively conferring resistance to copper and arsenic were identified.
摘要
在此，我们报告了从中国紫金金铜矿分离出的假节杆菌属菌株AG30的特征和基因组草图序列。假节杆菌属AG30的基因组大小为4,618,494 bp，G+C含量为66.2%。鉴定出了可能赋予对铜和砷抗性的有趣基因和操纵子。
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本文引用的文献
1
A horizontally gene transferred copper resistance locus confers hyper-resistance to antibacterial copper toxicity and enables survival of community acquired methicillin resistant Staphylococcus aureus USA300 in macrophages.
Environ Microbiol. 2018 Apr;20(4):1576-1589. doi: 10.1111/1462-2920.14088. Epub 2018 Mar 26.
2
Linking Genes to Microbial Biogeochemical Cycling: Lessons from Arsenic.
Environ Sci Technol. 2017 Jul 5;51(13):7326-7339. doi: 10.1021/acs.est.7b00689. Epub 2017 Jun 23.
3
Two Lactococcus lactis thioredoxin paralogues play different roles in responses to arsenate and oxidative stress.
Microbiology (Reading). 2015 Mar;161(Pt 3):528-38. doi: 10.1099/mic.0.000029. Epub 2015 Jan 6.
4
The RAST Server: rapid annotations using subsystems technology.
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
5
CsoR regulates the copper efflux operon copZA in Bacillus subtilis.
Microbiology (Reading). 2007 Dec;153(Pt 12):4123-4128. doi: 10.1099/mic.0.2007/011742-0.
6
arsRBOCT arsenic resistance system encoded by linear plasmid pHZ227 in Streptomyces sp. strain FR-008.
Appl Environ Microbiol. 2006 May;72(5):3738-42. doi: 10.1128/AEM.72.5.3738-3742.2006.
7
Novel pathway for arsenic detoxification in the legume symbiont Sinorhizobium meliloti.
J Bacteriol. 2005 Oct;187(20):6991-7. doi: 10.1128/JB.187.20.6991-6997.2005.
8
Genetic and transcriptional analysis of a novel plasmid-encoded copper resistance operon from Lactococcus lactis.
Gene. 2002 Sep 4;297(1-2):241-7. doi: 10.1016/s0378-1119(02)00918-6.
9
Basic local alignment search tool.
J Mol Biol. 1990 Oct 5;215(3):403-10. doi: 10.1016/S0022-2836(05)80360-2.
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