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从小麦根际(普通小麦)分离的细菌菌株中异养锌动员过程的鉴定。

Identification of Heterotrophic Zinc Mobilization Processes among Bacterial Strains Isolated from Wheat Rhizosphere (Triticum aestivum L.).

作者信息

Costerousse Benjamin, Schönholzer-Mauclaire Laurie, Frossard Emmanuel, Thonar Cécile

机构信息

Group of Plant Nutrition, Institute of Agricultural Sciences (IAS), ETH Zurich, Lindau, Switzerland

Group of Plant Nutrition, Institute of Agricultural Sciences (IAS), ETH Zurich, Lindau, Switzerland.

出版信息

Appl Environ Microbiol. 2017 Dec 15;84(1). doi: 10.1128/AEM.01715-17. Print 2018 Jan 1.

Abstract

Soil and plant inoculation with heterotrophic zinc-solubilizing bacteria (ZSB) is considered a promising approach for increasing zinc (Zn) phytoavailability and enhancing crop growth and nutritional quality. Nevertheless, it is necessary to understand the underlying bacterial solubilization processes to predict their repeatability in inoculation strategies. Acidification via gluconic acid production remains the most reported process. In this study, wheat rhizosphere soil serial dilutions were plated on several solid microbiological media supplemented with scarcely soluble Zn oxide (ZnO), and 115 putative Zn-solubilizing isolates were directly detected based on the formation of solubilization halos around the colonies. Eight strains were selected based on their Zn solubilization efficiency and siderophore production capacity. These included one strain of , two of , three strains of , one of , and one strain of In ZnO liquid solubilization assays, the presence of glucose clearly stimulated organic acid production, leading to medium acidification and ZnO solubilization. While solubilization by and was attributed to the accumulated production of six and seven different organic acids, respectively, the other strains solubilized Zn via gluconic, malonic, and oxalic acids exclusively. In contrast, in the absence of glucose, ZnO dissolution resulted from proton extrusion (e.g., via ammonia consumption by strains) and complexation processes (i.e., complexation with glutamic acid in cultures of ). Therefore, while gluconic acid production was described as a major Zn solubilization mechanism in the literature, this study goes beyond and shows that solubilization mechanisms vary among ZSB and are strongly affected by growth conditions. Barriers toward a better understanding of the mechanisms underlying zinc (Zn) solubilization by bacteria include the lack of methodological tools for isolation, discrimination, and identification of such organisms. Our study proposes a direct bacterial isolation procedure, which prevents the need to screen numerous bacterial candidates (for which the ability to solubilize Zn is unknown) for recovering Zn-solubilizing bacteria (ZSB). Moreover, we confirm the potential of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) as a quick and accurate tool for the identification and discrimination of environmental bacterial isolates. This work also describes various Zn solubilization processes used by wheat rhizosphere bacteria, including proton extrusion and the production of different organic acids among bacterial strains. These processes were also clearly affected by growth conditions (i.e., solid versus liquid cultures and the presence and absence of glucose). Although highlighted mechanisms may have significant effects at the soil-plant interface, these should only be transposed cautiously to real ecological situations.

摘要

用异养型锌溶解细菌(ZSB)对土壤和植物进行接种被认为是一种有前景的方法,可提高锌(Zn)的植物有效性,促进作物生长并改善营养品质。然而,有必要了解潜在的细菌溶解过程,以预测其在接种策略中的可重复性。通过产生葡萄糖酸进行酸化仍然是报道最多的过程。在本研究中,将小麦根际土壤系列稀释液接种在几种添加了难溶性氧化锌(ZnO)的固体微生物培养基上,并根据菌落周围溶解晕的形成直接检测到115株假定的锌溶解菌株。根据锌溶解效率和铁载体生产能力选择了8个菌株。其中包括1株[具体菌株名称1]、2株[具体菌株名称2]、3株[具体菌株名称3]、1株[具体菌株名称4]和1株[具体菌株名称5]。在ZnO液体溶解试验中,葡萄糖的存在明显刺激了有机酸的产生,导致培养基酸化和ZnO溶解。虽然[具体菌株名称1]和[具体菌株名称2]的溶解分别归因于六种和七种不同有机酸的积累产生,但其他菌株仅通过葡萄糖酸、丙二酸和草酸溶解锌。相比之下,在没有葡萄糖的情况下,ZnO的溶解是由于质子外排(例如,[具体菌株名称3]菌株通过消耗氨)和络合过程(即,[具体菌株名称4]培养物中与谷氨酸的络合)。因此,虽然在文献中葡萄糖酸的产生被描述为主要的锌溶解机制,但本研究进一步表明,锌溶解机制在ZSB之间存在差异,并且受到生长条件的强烈影响。阻碍更好地理解细菌溶解锌的潜在机制包括缺乏用于分离、区分和鉴定此类生物体的方法工具。我们的研究提出了一种直接的细菌分离程序,无需筛选大量细菌候选物(其锌溶解能力未知)来回收锌溶解细菌(ZSB)。此外,我们证实了基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)作为一种快速准确的工具,可用于鉴定和区分环境细菌分离物。这项工作还描述了小麦根际细菌使用的各种锌溶解过程,包括质子外排和不同细菌菌株中不同有机酸的产生。这些过程也明显受到生长条件的影响(即固体与液体培养以及葡萄糖的存在与否)。尽管突出显示的机制可能在土壤-植物界面产生重大影响,但这些机制在实际生态情况下的应用应谨慎。

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