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构建. 综合剂量匹配核心组蛋白突变体文库

Construction of Comprehensive Dosage-Matching Core Histone Mutant Libraries for .

机构信息

MOE Key laboratory of Bioinformatics and Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing 100084, PR China.

Center for Synthetic Biology Engineering Research, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.

出版信息

Genetics. 2017 Dec;207(4):1263-1273. doi: 10.1534/genetics.117.300450. Epub 2017 Oct 30.

Abstract

contains two genes for each core histone, which are presented as pairs under the control of a divergent promoter, , , , and , and encode histone H3 and H4 with identical amino acid sequences but under the control of differently regulated promoters. Previous mutagenesis studies were carried out by deleting one pair and mutating the other one. Here, we present the design and construction of three additional libraries covering , , and respectively. Together with the previously described library of mutants, a systematic and complete collection of mutants for each of the eight core histone genes becomes available. Each designed mutant was incorporated into the genome, generating three more corresponding libraries of yeast strains. We demonstrated that, although, under normal growth conditions, strains with single-copy integrated histone genes lacked phenotypes, in some growth conditions, growth deficiencies were observed. Specifically, we showed that addition of a second copy of the mutant histone gene could rescue the lethality in some previously known mutants that cannot survive with a single copy. This resource enables systematic studies of function of each nucleosome residue in plasmid, single-copy, and double-copy integrated formats.

摘要

该基因簇包含两个核心组蛋白基因,它们在一个发散启动子的控制下呈现为一对,和分别编码组蛋白 H3 和 H4,其氨基酸序列完全相同,但受不同调控启动子的控制。以前的诱变研究是通过删除一对并突变另一对来进行的。在这里,我们设计并构建了三个额外的文库,分别覆盖、和。加上之前描述的突变体文库,每个核心组蛋白基因的突变体系统和完整的集合都可用。每个设计的突变体都被整合到基因组中,生成了三个对应的酵母菌株文库。我们证明,尽管在正常生长条件下,带有单拷贝整合组蛋白基因的菌株没有表型,但在某些生长条件下,观察到了生长缺陷。具体来说,我们表明,添加第二个突变组蛋白基因拷贝可以挽救一些以前已知的在单拷贝条件下不能存活的突变体的致死性。该资源使我们能够在质粒、单拷贝和双拷贝整合形式下系统地研究每个核小体残基的功能。

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