Webb-Robertson Bobbie-Jo M, Bramer Lisa M, Jensen Jeffrey L, Kobold Markus A, Stratton Kelly G, White Amanda M, Rodland Karin D
Pacific Northwest National Laboratory, Richland, Washington.
Cancer Res. 2017 Nov 1;77(21):e47-e50. doi: 10.1158/0008-5472.CAN-17-0335.
P-MartCancer is an interactive web-based software environment that enables statistical analyses of peptide or protein data, quantitated from mass spectrometry-based global proteomics experiments, without requiring in-depth knowledge of statistical programming. P-MartCancer offers a series of statistical modules associated with quality assessment, peptide and protein statistics, protein quantification, and exploratory data analyses driven by the user via customized workflows and interactive visualization. Currently, P-MartCancer offers access and the capability to analyze multiple cancer proteomic datasets generated through the Clinical Proteomics Tumor Analysis Consortium at the peptide, gene, and protein levels. P-MartCancer is deployed as a web service (https://pmart.labworks.org/cptac.html), alternatively available via Docker Hub (https://hub.docker.com/r/pnnl/pmart-web/). .
P-MartCancer是一个基于网络的交互式软件环境，它能够对基于质谱的全球蛋白质组学实验所定量的肽或蛋白质数据进行统计分析，而无需深入了解统计编程知识。P-MartCancer提供了一系列与质量评估、肽和蛋白质统计、蛋白质定量以及由用户通过定制工作流程和交互式可视化驱动的探索性数据分析相关的统计模块。目前，P-MartCancer提供了在肽、基因和蛋白质水平上分析通过临床蛋白质组肿瘤分析联盟生成的多个癌症蛋白质组数据集的途径和能力。P-MartCancer作为一个网络服务（https://pmart.labworks.org/cptac.html）进行部署，也可通过Docker Hub（https://hub.docker.com/r/pnnl/pmart-web/）获得。
