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乙酰化组学分析揭示了硅藻中脂肪酸代谢途径的广泛赖氨酸乙酰化

Acetylome Profiling Reveals Extensive Lysine Acetylation of the Fatty Acid Metabolism Pathway in the Diatom .

机构信息

From the ‡Key Laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.

§Key Laboratory of Plant Stress Research, College of Life Science, Shandong Normal University, Jinan 250014, Shandong, China.

出版信息

Mol Cell Proteomics. 2018 Mar;17(3):399-412. doi: 10.1074/mcp.RA117.000339. Epub 2017 Nov 1.

Abstract

N-lysine acetylation represents a highly dynamic and reversibly regulated post-translational modification widespread in almost all organisms, and plays important roles for regulation of protein function in diverse metabolic pathways. However, little is known about the role of lysine acetylation in photosynthetic eukaryotic microalgae. We integrated proteomic approaches to comprehensively characterize the lysine acetylome in the model diatom In total, 2324 acetylation sites from 1220 acetylated proteins were identified, representing the largest data set of the lysine acetylome in plants to date. Almost all enzymes involved in fatty acid synthesis were found to be lysine acetylated. Six putative lysine acetylation sites were identified in a plastid-localized long-chain acyl-CoA synthetase. Site-directed mutagenesis and site-specific incorporation of N-acetyllysine in acyl-CoA synthetase show that acetylation at K407 and K425 increases its enzyme activity. Moreover, the nonenzymatically catalyzed overall hyperacetylation of acyl-CoA synthetase by acetyl-phosphate can be effectively deacetylated and reversed by a sirtuin-type NAD-dependent deacetylase with subcellular localization of both the plastid and nucleus in This work indicates the regulation of acyl-CoA synthetase activity by site-specific lysine acetylation and highlights the potential regulation of fatty acid metabolism by lysine actetylation in the plastid of the diatom .

摘要

N-赖氨酸乙酰化代表了一种广泛存在于几乎所有生物体中的高度动态和可逆调控的翻译后修饰,对于调节各种代谢途径中的蛋白质功能具有重要作用。然而,赖氨酸乙酰化在光合真核微藻中的作用知之甚少。我们整合了蛋白质组学方法,全面描绘了模型硅藻中的赖氨酸乙酰组。总共鉴定出 2324 个来自 1220 个乙酰化蛋白的乙酰化位点,代表了迄今为止植物中赖氨酸乙酰组的最大数据集。几乎所有参与脂肪酸合成的酶都被发现赖氨酸乙酰化。在定位于质体的长链酰基辅酶 A 合成酶中鉴定出六个假定的赖氨酸乙酰化位点。定点突变和酰基辅酶 A 合成酶中 N-乙酰赖氨酸的特异性掺入表明,K407 和 K425 的乙酰化增加了其酶活性。此外,乙酰磷酸非酶催化酰基辅酶 A 合成酶的整体过度乙酰化可以被质体和核的 NAD 依赖性依赖脱乙酰酶有效去乙酰化和逆转,该酶具有质体和核的亚细胞定位。这项工作表明,酰基辅酶 A 合成酶活性受特定赖氨酸乙酰化的调控,并突出了质体中赖氨酸乙酰化对硅藻脂肪酸代谢的潜在调控作用。

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