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日本新发现的 Entoloma rhodopolium 相关种的分子系统发育分析及其 PCR-RFLP 鉴定方法。

Molecular phylogenetic analysis of new Entoloma rhodopolium-related species in Japan and its identification method using PCR-RFLP.

机构信息

Division of Biochemistry, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki, 210-9501, Japan.

The Tottori Mycological Institute 211 Kokoge, Tottori-shi, Tottori, 689-1125, Japan.

出版信息

Sci Rep. 2017 Nov 2;7(1):14942. doi: 10.1038/s41598-017-14466-x.

DOI:10.1038/s41598-017-14466-x
PMID:29097736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5668239/
Abstract

Poisonous Entoloma rhodopolium and other similar species including edible E. sarcopum are morphologically diverse. People mistake poisonous species for edible species. Classification and the detection method of these species need to be defined. The morphological and phylogenetic studies have been reported in northern Europe. In Japan, the genetic study remains unsolved. Thus, phylogenetic analysis of E. rhodopolium was conducted using ITS and RPB2 sequences, and the result was compared with that of European species. Japanese E. rhodopolium was classified into three clades, none of which belonged to the true European E. rhodopolium and other known species. Three species were defined as new species. Entoloma rhodopolium clade-I (named E. lacus) was genetically close to but morphologically separated from E. majaloides. Clade-II (E. subrhodopolium) was classified to the same group as E. sinuatum and E. subsinuatum, but distinct from these species. Clade-III was segregated from known Entoloma species including E. lupinum, and named E. pseudorhodopolium. Based on the classification, a simple identification method PCR-RFLP was developed to discriminate between poisonous species and edible E. sarcopum, which is very similar in morphology. The study can help to clarify the taxonomy of complex E. rhodopolium-related species, and to prevent food poisoning.

摘要

毒蝇鹅膏菌 rhodopolium 和其他类似的物种,包括可食用的 E. sarcopum,在形态上具有多样性。人们会将有毒物种误认为可食用物种。因此,需要对这些物种进行分类和检测方法的定义。在北欧已经有关于这些物种的形态学和系统发育学研究的报道。在日本,遗传研究尚未解决。因此,对日本的毒蝇鹅膏菌 rhodopolium 使用 ITS 和 RPB2 序列进行了系统发育分析,并将结果与欧洲物种进行了比较。日本的毒蝇鹅膏菌 rhodopolium 分为三个分支,没有一个分支属于真正的欧洲毒蝇鹅膏菌 rhodopolium 和其他已知物种。确定了三个新种。分支 I(命名为 E. lacus)在遗传上与 E. majaloides 密切相关,但在形态上有所分离。分支 II(E. subrhodopolium)与 E. sinuatum 和 E. subsinuatum 分类为同一组,但与这些物种不同。分支 III 与包括 E. lupinum 在内的已知鹅膏菌物种分离,命名为 E. pseudorhodopolium。基于分类,开发了一种简单的 PCR-RFLP 识别方法,用于区分形态非常相似的有毒物种和可食用的 E. sarcopum。这项研究有助于阐明复杂的毒蝇鹅膏菌相关物种的分类学,防止食物中毒。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/599823e5c090/41598_2017_14466_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/5ade2178382d/41598_2017_14466_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/f824a1d1a711/41598_2017_14466_Fig2_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/c49b017bb9b5/41598_2017_14466_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/991cf65465f0/41598_2017_14466_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/599823e5c090/41598_2017_14466_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/5ade2178382d/41598_2017_14466_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/f824a1d1a711/41598_2017_14466_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/e0ba91e34744/41598_2017_14466_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/de586205336e/41598_2017_14466_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/c49b017bb9b5/41598_2017_14466_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/991cf65465f0/41598_2017_14466_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca15/5668239/599823e5c090/41598_2017_14466_Fig7_HTML.jpg

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