Machens Fabian, Balazadeh Salma, Mueller-Roeber Bernd, Messerschmidt Katrin
University of Potsdam, Cell2Fab Research Unit, Potsdam, Germany.
Max-Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Front Bioeng Biotechnol. 2017 Oct 19;5:63. doi: 10.3389/fbioe.2017.00063. eCollection 2017.
Orthogonal systems for heterologous protein expression as well as for the engineering of synthetic gene regulatory circuits in hosts like depend on synthetic transcription factors (synTFs) and corresponding -regulatory binding sites. We have constructed and characterized a set of synTFs based on either transcription activator-like effectors or CRISPR/Cas9, and corresponding small synthetic promoters (synPs) with minimal sequence identity to the host's endogenous promoters. The resulting collection of functional synTF/synP pairs confers very low background expression under uninduced conditions, while expression output upon induction of the various synTFs covers a wide range and reaches induction factors of up to 400. The broad spectrum of expression strengths that is achieved will be useful for various experimental setups, e.g., the transcriptional balancing of expression levels within heterologous pathways or the construction of artificial regulatory networks. Furthermore, our analyses reveal simple rules that enable the tuning of synTF expression output, thereby allowing easy modification of a given synTF/synP pair. This will make it easier for researchers to construct tailored transcriptional control systems.
用于异源蛋白表达以及在诸如宿主中构建合成基因调控电路的正交系统依赖于合成转录因子(synTFs)和相应的调控结合位点。我们基于转录激活样效应物或CRISPR/Cas9构建并表征了一组合成转录因子,以及与宿主内源性启动子具有最小序列同一性的相应小型合成启动子(synPs)。由此产生的功能性synTF/synP对集合在未诱导条件下具有非常低的背景表达,而在诱导各种synTF时的表达输出范围很广,诱导因子高达400。所实现的广泛表达强度谱将对各种实验设置有用,例如,异源途径内表达水平的转录平衡或人工调控网络的构建。此外,我们的分析揭示了能够调节synTF表达输出的简单规则,从而允许对给定的synTF/synP对进行轻松修改。这将使研究人员更容易构建定制的转录控制系统。