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Comparison of Archaeal Communities in Mineral Soils at a Boreal Forest in Finland and a Cold-Temperate Forest in Japan.

作者信息

Isoda Reika, Hara Shintaro, Tahvanainen Teemu, Hashidoko Yasuyuki

机构信息

Research Faculty of Agriculture, Hokkaido University.

Department of Biology, University of Eastern Finland.

出版信息

Microbes Environ. 2017 Dec 27;32(4):390-393. doi: 10.1264/jsme2.ME17100. Epub 2017 Nov 7.

DOI:10.1264/jsme2.ME17100
PMID:29109334
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5745025/
Abstract

Archaeal communities in mineral soils were compared between a boreal forest in Finland and cold-temperate forest in Japan using 16S rRNA gene-targeted high-throughput sequencing. In boreal soils, Thaumarchaeota Group 1.1c archaea predominated and Thaumarchaeota Group 1.1a-associated and Group 1.1b archaea were also detected. In temperate soils, Thaumarchaeota Group 1.1a-associated and Group 1.1b archaea were dominant members at the subsurface, whereas their dominancy was replaced by Thermoplasmata archaea at the subsoil. An analysis of the ammonia monooxygenase subunit A gene of Archaea also indicated the distribution of Thaumarchaeota Group 1.1a-associated and Group 1.1b archaea in these soils.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/cbfc8b9e0170/32_390_3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/edf52eac2357/32_390_1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/adb8c49a3fd4/32_390_2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/cbfc8b9e0170/32_390_3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/edf52eac2357/32_390_1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/adb8c49a3fd4/32_390_2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83de/5745025/cbfc8b9e0170/32_390_3.jpg

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本文引用的文献

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ISME J. 2016 Jan;10(1):85-96. doi: 10.1038/ismej.2015.101. Epub 2015 Jul 3.
2
Metabolic potential of fatty acid oxidation and anaerobic respiration by abundant members of Thaumarchaeota and Thermoplasmata in deep anoxic peat.深缺氧泥炭中泉古菌门和嗜热栖热菌门丰富成员的脂肪酸氧化和无氧呼吸代谢潜力
ISME J. 2015 Dec;9(12):2740-4. doi: 10.1038/ismej.2015.77. Epub 2015 May 22.
3
Ammonia oxidation is not required for growth of Group 1.1c soil Thaumarchaeota.
氮循环:一个庞大、快速且神秘的循环。
Microbes Environ. 2019;34(3):223-225. doi: 10.1264/jsme2.ME3403rh.
1.1c组土壤奇古菌的生长不需要氨氧化作用。
FEMS Microbiol Ecol. 2015 Mar;91(3). doi: 10.1093/femsec/fiv001. Epub 2015 Jan 13.
4
The history of aerobic ammonia oxidizers: from the first discoveries to today.好氧氨氧化菌的历史:从首次发现到如今。
J Microbiol. 2014 Jul;52(7):537-47. doi: 10.1007/s12275-014-4114-0. Epub 2014 Jun 28.
5
Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota.氮单胞菌属,新属,一种好氧、嗜中温、氨氧化古菌,来自土壤,属于古菌门的泉古菌纲。
Int J Syst Evol Microbiol. 2014 Aug;64(Pt 8):2738-2752. doi: 10.1099/ijs.0.063172-0. Epub 2014 Jun 6.
6
Ammonia oxidizers are pioneer microorganisms in the colonization of new acidic volcanic soils from South of Chile.氨氧化微生物是智利南部新形成的酸性火山土壤中最早定植的微生物。
Environ Microbiol Rep. 2014 Feb;6(1):70-9. doi: 10.1111/1758-2229.12109. Epub 2013 Oct 21.
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