Wang Yue, Wan Fangning, Chang Kun, Lu Xiaolin, Dai Bo, Ye Dingwei
Department of Urology, Fudan University Shanghai Cancer Center, Shanghai 20032, P.R. China.
Department of Oncology, Shanghai Medical College, Fudan University, Shanghai 20032, P.R. China.
Oncol Lett. 2017 Nov;14(5):6121-6128. doi: 10.3892/ol.2017.6997. Epub 2017 Sep 18.
The nudix hydroxylase (NUDT) family of genes may have notable roles in cancer growth and metastasis. The present study aimed to determine the prognostic ability of NUDT genes in clear cell renal cell carcinoma (ccRCC). Data from 509 patients with ccRCC was obtained from The Cancer Genome Atlas (TCGA) database and 192 patient samples from Fudan University Shanghai Cancer Center (FUSCC) were analyzed in the present study. The expression profile of NUDT gene family members in the TCGA cohort was obtained from the TCGA RNA sequencing database. Pathological characteristics, including age, sex, tumor size, tumor grade, stage, laterality and overall survival were collected. Cox proportional hazards regression model and Kaplan-Meier survival analysis were performed to assess the associations between pathological characteristics and expression levels of NUDT family genes. NUDT family genes that exhibited associations with overall survival (OS) were further validated in the FUSCC cohort. In the TCGA cohort, Cox proportional hazards analysis found that NUDT5 [hazards ratio (HR)=1.676; 95% confidence interval (CI), 1.097-2.559] and NUDT17 (HR=1.375; 95% CI, 1.092-1.732) were predictive of ccRCC prognosis. Further analysis revealed that low NUDT5 (P<0.0001) and NUDT17 (P<0.0001) expression were associated with poorer OS rates in the TCGA cohort. In the FUSCC cohort, low NUDT5 expression was also associated with poor OS rates (P=0.0116), and tumor grade was a factor that influenced the expression level of NUDT5 (P=0.016).
Nudix 羟化酶(NUDT)基因家族可能在癌症生长和转移中发挥显著作用。本研究旨在确定 NUDT 基因在透明细胞肾细胞癌(ccRCC)中的预后评估能力。本研究获取了来自癌症基因组图谱(TCGA)数据库的 509 例 ccRCC 患者的数据,并分析了来自复旦大学附属肿瘤医院(FUSCC)的 192 例患者样本。从 TCGA RNA 测序数据库中获取了 TCGA 队列中 NUDT 基因家族成员的表达谱。收集了包括年龄、性别、肿瘤大小、肿瘤分级、分期、左右侧性和总生存期等病理特征。采用 Cox 比例风险回归模型和 Kaplan-Meier 生存分析来评估病理特征与 NUDT 家族基因表达水平之间的关联。在 FUSCC 队列中进一步验证了与总生存期(OS)相关的 NUDT 家族基因。在 TCGA 队列中,Cox 比例风险分析发现 NUDT5 [风险比(HR)=1.676;95%置信区间(CI),1.097 - 2.559] 和 NUDT17(HR = 1.375;95% CI,1.092 - 1.732)可预测 ccRCC 的预后。进一步分析显示,在 TCGA 队列中,低 NUDT5(P < 0.0001)和 NUDT17(P < 0.0001)表达与较差的 OS 率相关。在 FUSCC 队列中,低 NUDT5 表达也与较差的 OS 率相关(P = 0.0116),并且肿瘤分级是影响 NUDT5 表达水平的一个因素(P = 0.016)。