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解黄原胶类芽孢杆菌新种,一种从土壤中分离出的可降解黄原胶的细菌。

Paenibacillus xanthanilyticus sp. nov., a xanthan-degrading bacterium isolated from soil.

作者信息

Ashraf Simin, Soudi Mohammad Reza, Amoozegar Mohammad Ali, Moshtaghi Nikou Mahdi, Spröer Cathrin

机构信息

Department of Microbiology, Faculty of Biological Sciences, Alzahra University, Tehran, Iran.

Department of Microbiology, Extremophiles Laboratory, Faculty of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, Tehran, Iran.

出版信息

Int J Syst Evol Microbiol. 2018 Jan;68(1):76-80. doi: 10.1099/ijsem.0.002453. Epub 2017 Nov 14.

Abstract

A xanthan-degrading bacterium, strain AS7, was isolated from soil and its taxonomic position was determined using a polyphasic approach. Strain AS7 was a Gram-stain-variable, spore-forming, motile, aerobic, rod-shaped bacterium. Phylogenetic analysis based on 16S rRNA gene sequence analysis revealed that strain AS7 belongs to the genus Paenibacillus, sharing the highest level of sequence similarity with Paenibacillus phyllosphaerae PALXIL04 (98.0 %). The cell-wall peptidoglycan contained meso-diaminopimelic acid. MK-7 was the dominant isoprenoid quinone and the major fatty acid was anteiso-C15 : 0. Polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and two unknown phospholipids. These chemotaxonomic characteristics were consistent with the isolate belonging to the genus Paenibacillus. The G+C content of the genomic DNA was 51.0 mol% and the DNA-DNA hybridization value between strain AS7 and P. phyllosphaerae PALXIL04 was only 14.4±2.5 %. On the basis of phylogenetic analyses, phenotypic and chemotaxonomic characteristics, and DNA-DNA relatedness value, strain AS7 represents a novel species of the genus Paenibacillus, for which the name Paenibacillus xanthanilyticus sp. nov. is proposed. The type strain is AS7 (=IBRC M 10987=LMG 29451).

摘要

从土壤中分离出一株能降解黄原胶的细菌AS7菌株,并采用多相分类法确定其分类地位。AS7菌株革兰氏染色可变,形成芽孢,具运动性,好氧,杆状。基于16S rRNA基因序列分析的系统发育分析表明,AS7菌株属于类芽孢杆菌属,与叶鞘类芽孢杆菌PALXIL04的序列相似性最高(98.0%)。细胞壁肽聚糖含有内消旋二氨基庚二酸。MK-7是主要的类异戊二烯醌,主要脂肪酸是anteiso-C15 : 0。极性脂质由双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺和两种未知磷脂组成。这些化学分类特征与该分离株属于类芽孢杆菌属一致。基因组DNA的G+C含量为51.0 mol%,AS7菌株与叶鞘类芽孢杆菌PALXIL04之间的DNA-DNA杂交值仅为14.4±2.5%。基于系统发育分析、表型和化学分类特征以及DNA-DNA相关性值,AS7菌株代表类芽孢杆菌属的一个新物种,为此提出新名称解黄原胶类芽孢杆菌(Paenibacillus xanthanilyticus sp. nov.)。模式菌株为AS7(=IBRC M 10987=LMG 29451)。

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