• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

植物细胞身份转变的概念框架

A Conceptual Framework for Cell Identity Transitions in Plants.

机构信息

Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University, Rehovot, Israel.

出版信息

Plant Cell Physiol. 2018 Apr 1;59(4):691-701. doi: 10.1093/pcp/pcx172.

DOI:10.1093/pcp/pcx172
PMID:29136202
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6018971/
Abstract

Multicellular organisms develop from a single cell that proliferates to form different cell types with specialized functions. Sixty years ago, Waddington suggested the 'epigenetic landscape' as a useful metaphor for the process. According to this view, cells move through a rugged identity space along genetically encoded trajectories, until arriving at one of the possible final fates. In plants in particular, these trajectories have strong spatial correlates, as cell identity is intimately linked to its relative position within the plant. During regeneration, however, positional signals are severely disrupted and differentiated cells are able to undergo rapid non-canonical identity changes. Moreover, while pluripotent properties have long been ascribed to plant cells, the introduction of induced pluripotent stem cells in animal studies suggests such plasticity may not be unique to plants. As a result, current concepts of differentiation as a gradual and hierarchical process are being reformulated across biological fields. Traditional studies of plant regeneration have placed strong emphasis on the emergence of patterns and tissue organization, and information regarding the events occurring at the level of individual cells is only now beginning to emerge. Here, I review the historical and current concepts of cell identity and identity transitions, and discuss how new views and tools may instruct the future understanding of differentiation and plant regeneration.

摘要

多细胞生物由一个单一的细胞增殖而来,这个细胞会分化形成具有特定功能的不同细胞类型。六十年前,Waddington 提出“表观遗传景观”作为这一过程的有用隐喻。根据这一观点,细胞沿着遗传编码的轨迹在崎岖不平的身份空间中移动,直到到达可能的最终命运之一。在植物中,这些轨迹具有很强的空间相关性,因为细胞身份与其在植物中的相对位置密切相关。然而,在再生过程中,位置信号会严重受到干扰,分化细胞能够快速经历非典型的身份变化。此外,尽管多能性特性长期以来被归因于植物细胞,但在动物研究中引入诱导多能干细胞表明这种可塑性可能不是植物所特有的。因此,目前关于分化是一个逐渐和分层的过程的概念正在整个生物学领域重新制定。传统的植物再生研究非常强调模式和组织的出现,而关于单个细胞水平发生的事件的信息现在才刚刚开始出现。在这里,我回顾了细胞身份和身份转变的历史和当前概念,并讨论了新的观点和工具如何指导未来对分化和植物再生的理解。

相似文献

1
A Conceptual Framework for Cell Identity Transitions in Plants.植物细胞身份转变的概念框架
Plant Cell Physiol. 2018 Apr 1;59(4):691-701. doi: 10.1093/pcp/pcx172.
2
Rethinking differentiation: stem cells, regeneration, and plasticity.重新思考分化:干细胞、再生和可塑性。
Cell. 2014 Mar 27;157(1):110-9. doi: 10.1016/j.cell.2014.02.041.
3
Leveling Waddington: the emergence of direct programming and the loss of cell fate hierarchies.拉平沃丁顿:直接编程的出现与细胞命运层级的丧失。
Nat Rev Mol Cell Biol. 2013 Apr;14(4):225-36. doi: 10.1038/nrm3543. Epub 2013 Mar 13.
4
Plant and animal stem cells: similar yet different.植物和动物干细胞:相似但不同。
Nat Rev Mol Cell Biol. 2014 May;15(5):301-12. doi: 10.1038/nrm3790.
5
On the origins and conceptual frameworks of natural plasticity-Lessons from single-cell models in C. elegans.论自然可塑性的起源和概念框架——秀丽隐杆线虫单细胞模型的启示。
Curr Top Dev Biol. 2021;144:111-159. doi: 10.1016/bs.ctdb.2021.03.004. Epub 2021 Apr 29.
6
Emerging concepts in chromatin-level regulation of plant cell differentiation: timing, counting, sensing and maintaining.植物细胞分化中染色质水平调控的新兴概念:计时、计数、感知和维持。
Curr Opin Plant Biol. 2016 Dec;34:27-34. doi: 10.1016/j.pbi.2016.07.010. Epub 2016 Aug 11.
7
Plant Cell Identity in the Era of Single-Cell Transcriptomics.单细胞转录组学时代的植物细胞身份
Annu Rev Genet. 2021 Nov 23;55:479-496. doi: 10.1146/annurev-genet-071719-020453. Epub 2021 Sep 16.
8
Cell identity specification in plants: lessons from flower development.植物细胞身份的特化:从花发育中得到的启示。
J Exp Bot. 2021 May 28;72(12):4202-4217. doi: 10.1093/jxb/erab110.
9
Plant stem cell niches.植物干细胞龛。
Annu Rev Plant Biol. 2012;63:615-36. doi: 10.1146/annurev-arplant-042811-105555. Epub 2012 Feb 9.
10
Stem cell factors in plants: chromatin connections.植物中的干细胞因子:染色质连接
Cold Spring Harb Symp Quant Biol. 2008;73:235-42. doi: 10.1101/sqb.2008.73.043. Epub 2009 Jan 15.

引用本文的文献

1
Small molecules, enormous functions: potential approach for overcoming bottlenecks in embryogenic tissue induction and maintenance in conifers.小分子,巨大功能:克服针叶树胚性组织诱导和维持瓶颈的潜在方法。
Hortic Res. 2024 Jul 10;11(8):uhae180. doi: 10.1093/hr/uhae180. eCollection 2024 Aug.
2
What Is a Plant Cell Type in the Age of Single-Cell Biology? It's Complicated.在单细胞生物学时代,什么是植物细胞类型?这很复杂。
Annu Rev Cell Dev Biol. 2024 Oct;40(1):301-328. doi: 10.1146/annurev-cellbio-111323-102412. Epub 2024 Sep 21.
3
Exploring plant cis-regulatory elements at single-cell resolution: overcoming biological and computational challenges to advance plant research.单细胞分辨率下的植物顺式调控元件研究:克服生物学和计算学挑战以推进植物研究。
Plant J. 2023 Sep;115(6):1486-1499. doi: 10.1111/tpj.16351. Epub 2023 Jun 28.
4
RWP-RK Domain 3 (OsRKD3) induces somatic embryogenesis in black rice.RWP-RK 结构域 3(OsRKD3)诱导黑米体细胞胚胎发生。
BMC Plant Biol. 2023 Apr 19;23(1):202. doi: 10.1186/s12870-023-04220-z.
5
Induction of Somatic Embryogenesis in Plants: Different Players and Focus on WUSCHEL and WUS-RELATED HOMEOBOX (WOX) Transcription Factors.植物体细胞胚胎发生的诱导:不同的参与者及对 WUSCHEL 和 WUS-RELATED HOMEOBOX (WOX) 转录因子的关注。
Int J Mol Sci. 2022 Dec 15;23(24):15950. doi: 10.3390/ijms232415950.
6
Cell types as species: Exploring a metaphor.作为物种的细胞类型:探索一种隐喻。
Front Plant Sci. 2022 Aug 22;13:868565. doi: 10.3389/fpls.2022.868565. eCollection 2022.
7
A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants.一个拟南芥单细胞根系图谱揭示了野生型和细胞身份突变体的发育轨迹。
Dev Cell. 2022 Feb 28;57(4):543-560.e9. doi: 10.1016/j.devcel.2022.01.008. Epub 2022 Feb 7.
8
The hidden half comes into the spotlight: Peeking inside the black box of root developmental phases.隐性部分进入聚光灯下:窥视根发育阶段的黑箱内部。
Plant Commun. 2021 Sep 23;3(1):100246. doi: 10.1016/j.xplc.2021.100246. eCollection 2022 Jan 10.
9
The biology of time: dynamic responses of cell types to developmental, circadian and environmental cues.时间生物学:细胞类型对发育、昼夜节律和环境线索的动态响应。
Plant J. 2022 Feb;109(4):764-778. doi: 10.1111/tpj.15589. Epub 2021 Dec 6.
10
Meristem transitions and plant architecture-learning from domestication for crop breeding.顶端分生组织转变与植物结构——从驯化中学习以用于作物育种。
Plant Physiol. 2021 Nov 3;187(3):1045-1056. doi: 10.1093/plphys/kiab388.

本文引用的文献

1
In vivo FRET-FLIM reveals cell-type-specific protein interactions in Arabidopsis roots.体内 FRET-FLIM 揭示拟南芥根中细胞类型特异性蛋白质相互作用。
Nature. 2017 Aug 3;548(7665):97-102. doi: 10.1038/nature23317. Epub 2017 Jul 26.
2
Uncovering Gene Regulatory Networks Controlling Plant Cell Differentiation.揭示控制植物细胞分化的基因调控网络。
Trends Genet. 2017 Aug;33(8):529-539. doi: 10.1016/j.tig.2017.05.002. Epub 2017 Jun 21.
3
Type-B ARABIDOPSIS RESPONSE REGULATORs Specify the Shoot Stem Cell Niche by Dual Regulation of .B型拟南芥响应调节因子通过双重调控来确定茎尖干细胞微环境 。 (原文似乎不完整)
Plant Cell. 2017 Jun;29(6):1357-1372. doi: 10.1105/tpc.16.00640. Epub 2017 Jun 2.
4
Shoot stem cell specification in roots by the WUSCHEL transcription factor.通过WUSCHEL转录因子调控根中茎干细胞的特化。
PLoS One. 2017 Apr 26;12(4):e0176093. doi: 10.1371/journal.pone.0176093. eCollection 2017.
5
A Two-Step Model for de Novo Activation of during Plant Shoot Regeneration.植物茎尖再生过程中从头激活的两步模型。
Plant Cell. 2017 May;29(5):1073-1087. doi: 10.1105/tpc.16.00863. Epub 2017 Apr 7.
6
What Is Your Conceptual Definition of "Cell Type" in the Context of a Mature Organism?在成熟生物体的背景下,你对“细胞类型”的概念性定义是什么?
Cell Syst. 2017 Mar 22;4(3):255-259. doi: 10.1016/j.cels.2017.03.006.
7
Epigenetic memory and cell fate reprogramming in plants.植物中的表观遗传记忆与细胞命运重编程
Regeneration (Oxf). 2017 Feb 1;4(1):15-20. doi: 10.1002/reg2.73. eCollection 2017 Feb.
8
Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development.根原基直接转化为茎尖分生组织依赖于干细胞微环境发育的时机。
Development. 2017 Apr 1;144(7):1187-1200. doi: 10.1242/dev.142570. Epub 2017 Feb 7.
9
A Molecular Framework for the Embryonic Initiation of Shoot Meristem Stem Cells.胚胎启动茎分生组织干细胞的分子框架。
Dev Cell. 2017 Feb 6;40(3):264-277.e4. doi: 10.1016/j.devcel.2017.01.002.
10
WIND1 Promotes Shoot Regeneration through Transcriptional Activation of in Arabidopsis.WIND1通过转录激活促进拟南芥的芽再生
Plant Cell. 2017 Jan;29(1):54-69. doi: 10.1105/tpc.16.00623. Epub 2016 Dec 23.