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台湾种子植物的系统发育分类

Phylogenetic Classification of Seed Plants of Taiwan.

作者信息

Lin Cheng-Tao, Chung Kuo-Fang

机构信息

Department of Biological Resources, National Chiayi University, Chiayi, 60004, Taiwan.

Research Museum and Herbarium (HAST), Biodiversity Research Center, Academia Sinica, Taipei, 11529, Taiwan.

出版信息

Bot Stud. 2017 Nov 21;58(1):52. doi: 10.1186/s40529-017-0206-6.

DOI:10.1186/s40529-017-0206-6
PMID:29159759
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5696268/
Abstract

BACKGROUND

Biological classification, the hierarchical arrangement of scientific names of organisms, constitutes the core infrastructure of biological databases. For an efficient management of biological databases, adopting a stable and universal biological classification system is crucial. Currently in Taiwan Biodiversity Information Facility (TaiBIF; http://taibif.tw/ ), the national portal website that integrates Taiwan's biodiversity information databases, angiosperms are arranged according to Cronquist's System of Classification, which is not compatible with current trend of the Angiosperm Phylogeny Group (APG) classification. To consolidate the function and management of the database, TaiBIF is moving to adopt the APG IV classification and Christenhusz et al. (Phytotaxa 19:55-70, 2011)'s classification of gymnosperms, which we summarize as the Phylogenetic Classification of Seed Plants of Taiwan.

RESULTS

The Phylogenetic Classification of Seed Plants of Taiwan places gymnosperms in five families [vs. eight families in the Flora of Taiwan (FOT)] and angiosperms in 210 families (vs. 193 families in FOT). Three FOT gymnosperm families are synonymized in current treatment. Of the 210 APG IV families, familial circumscriptions of 114 families are identical with FOT and 50 families are recircumscription of FOT, with 46 families newly added. Of the 29 FOT families not included in current classification, two families are excluded and 27 families are synonymized.

CONCLUSIONS

The adoption of the Phylogenetic Classification of Seed Plants of Taiwan in TaiBIF will provide better service and efficient management of the nation's biodiversity information databases.

摘要

背景

生物分类,即生物体科学名称的层次排列,构成了生物数据库的核心基础设施。为了高效管理生物数据库,采用稳定且通用的生物分类系统至关重要。目前在台湾生物多样性信息设施平台(TaiBIF;http://taibif.tw/ ),这个整合了台湾生物多样性信息数据库的国家门户网站中,被子植物是按照克朗奎斯特分类系统排列的,这与当前被子植物系统发育研究组(APG)的分类趋势不兼容。为了巩固数据库的功能和管理,TaiBIF正转而采用APG IV分类法以及克里斯滕胡斯等人(《植物分类群》19:55 - 70,2011)对裸子植物的分类,我们将其总结为台湾种子植物系统发育分类。

结果

台湾种子植物系统发育分类将裸子植物置于5个科中(相比之下,《台湾植物志》中有8个科),将被子植物置于210个科中(相比之下,《台湾植物志》中有193个科)。在当前的分类处理中,《台湾植物志》中的3个裸子植物科被归为同义词。在APG IV的210个科中,114个科的科范围与《台湾植物志》相同,50个科是对《台湾植物志》的重新界定,新增了46个科。在当前分类中未包含的《台湾植物志》的29个科中,2个科被排除,27个科被归为同义词。

结论

TaiBIF采用台湾种子植物系统发育分类将为国家生物多样性信息数据库提供更好的服务和高效管理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22c3/5696268/c62c1cfe34fc/40529_2017_206_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22c3/5696268/c62c1cfe34fc/40529_2017_206_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22c3/5696268/c62c1cfe34fc/40529_2017_206_Fig1_HTML.jpg

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本文引用的文献

1
Molecular phylogenetics of an aquatic plant lineage, Potamogetonaceae.水生植物谱系眼子菜科的分子系统发育学
Cladistics. 2006 Dec;22(6):568-588. doi: 10.1111/j.1096-0031.2006.00124.x.
2
A higher level classification of all living organisms.所有生物的更高层次分类。
PLoS One. 2015 Apr 29;10(4):e0119248. doi: 10.1371/journal.pone.0119248. eCollection 2015.
3
Phylogeny and divergence times of gymnosperms inferred from single-copy nuclear genes.基于单拷贝核基因推断的裸子植物系统发育及分歧时间
Extensive sampling of in Taiwan reveals ecology and evolution of predomesticated lineages.
对台湾的广泛采样揭示了驯化谱系的生态和进化。
Genome Res. 2022 May;32(5):864-877. doi: 10.1101/gr.276286.121. Epub 2022 Mar 31.
PLoS One. 2014 Sep 15;9(9):e107679. doi: 10.1371/journal.pone.0107679. eCollection 2014.
4
Evolution and biogeography of gymnosperms.裸子植物的进化和生物地理学。
Mol Phylogenet Evol. 2014 Jun;75:24-40. doi: 10.1016/j.ympev.2014.02.005. Epub 2014 Feb 22.
5
Scientific names of organisms: attribution, rights, and licensing.生物体的学名:归属、权利和许可。
BMC Res Notes. 2014 Feb 4;7:79. doi: 10.1186/1756-0500-7-79.
6
Names are key to the big new biology.名称是新生物学的关键。
Trends Ecol Evol. 2010 Dec;25(12):686-91. doi: 10.1016/j.tree.2010.09.004. Epub 2010 Oct 18.
7
Biological classification: toward a synthesis of opposing methodologies.
Science. 1981 Oct 30;214(4520):510-6. doi: 10.1126/science.214.4520.510.
8
Phylogenetic systematics of the monotypic genus Hayataella (Rubiaceae) endemic to Taiwan.台湾特有单型属玉山茜草树属(茜草科)的系统发育系统学
J Plant Res. 2006 Nov;119(6):657-61. doi: 10.1007/s10265-006-0017-4. Epub 2006 Jul 26.
9
Molecular phylogeny of Myricaceae: a reexamination of host-symbiont specificity.杨梅科的分子系统发育:对宿主 - 共生体特异性的重新审视。
Mol Phylogenet Evol. 2005 Mar;34(3):557-68. doi: 10.1016/j.ympev.2004.11.018. Epub 2005 Jan 7.
10
Phylogenetic analyses and chromosome evolution in Convallarieae (Ruscaceae sensu lato), with some taxonomic treatments.铃兰族(广义菝葜科)的系统发育分析与染色体进化及一些分类处理
J Plant Res. 2004 Oct;117(5):363-70. doi: 10.1007/s10265-004-0169-z. Epub 2004 Sep 8.