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细胞内水动力学限制酿酒酵母糖酵解振荡。

The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae.

机构信息

Center for Biomembrane Physics (MEMPHYS), Odense M, Denmark.

Institute for Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, DK5230, Odense M, Denmark.

出版信息

Sci Rep. 2017 Nov 24;7(1):16250. doi: 10.1038/s41598-017-16442-x.

Abstract

We explored the dynamic coupling of intracellular water with metabolism in yeast cells. Using the polarity-sensitive probe 6-acetyl-2-dimethylaminonaphthalene (ACDAN), we show that glycolytic oscillations in the yeast S. cerevisiae BY4743 wild-type strain are coupled to the generalized polarization (GP) function of ACDAN, which measures the physical state of intracellular water. We analysed the oscillatory dynamics in wild type and 24 mutant strains with mutations in many different enzymes and proteins. Using fluorescence spectroscopy, we measured the amplitude and frequency of the metabolic oscillations and ACDAN GP in the resting state of all 25 strains. The results showed that there is a lower and an upper threshold of ACDAN GP, beyond which oscillations do not occur. This critical GP range is also phenomenologically linked to the occurrence of oscillations when cells are grown at different temperatures. Furthermore, the link between glycolytic oscillations and the ACDAN GP value also holds when ATP synthesis or the integrity of the cell cytoskeleton is perturbed. Our results represent the first demonstration that the dynamic behaviour of a metabolic process can be regulated by a cell-wide physical property: the dynamic state of intracellular water, which represents an emergent property.

摘要

我们探索了细胞内水与酵母细胞代谢的动态耦合。使用对极性敏感的探针 6-乙酰-2-二甲氨基萘(ACDAN),我们表明,酵母 S. cerevisiae BY4743 野生型菌株中的糖酵解振荡与 ACDAN 的广义极化(GP)功能耦合,该功能测量细胞内水的物理状态。我们分析了具有许多不同酶和蛋白质突变的 24 种突变株的振荡动力学。使用荧光光谱法,我们测量了所有 25 种菌株在静止状态下的代谢振荡和 ACDAN GP 的幅度和频率。结果表明,ACDAN GP 存在一个下限和上限阈值,超出该阈值就不会发生振荡。该临界 GP 范围在细胞在不同温度下生长时与振荡发生的情况也具有现象学联系。此外,当干扰 ATP 合成或细胞胞质骨架的完整性时,糖酵解振荡与 ACDAN GP 值之间的联系仍然存在。我们的研究结果首次证明,代谢过程的动态行为可以通过一种全细胞的物理性质来调节:细胞内水的动态状态,这是一种涌现的性质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2917/5701229/4ddcfe713c29/41598_2017_16442_Fig1_HTML.jpg

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