Das Sumita, Chatterjee Sabyasachi, Pramanik Srikrishna, Devi Parukuttyamma Sujatha, Kumar Gopinatha Suresh
Sensor and Actuator Division, CSIR-Central Glass and Ceramic Research Institute, Kolkata 700032, India.
Bio-physical Chemistry Laboratory, CSIR-Indian Institute of Chemical Biology, Kolkata 700032, India.
J Photochem Photobiol B. 2018 Jan;178:339-347. doi: 10.1016/j.jphotobiol.2017.10.039. Epub 2018 Jan 4.
Experimental evidences on the binding interaction of ZnO and Calf Thymus (CT) DNA using several biophysical techniques are the centre of interest of the present study. The interaction of ZnO with CT DNA has been investigated in detail by absorption spectral study, fluorescence titration, Raman analysis, zeta potential measurement, viscometric experiment along with thermal melting study and microscopic analysis. Steady-state fluorescence study revealed the quenching (48%) of the surface defect related peak intensity of ZnO on interaction with DNA. The optimized concentration of ZnO and DNA to obtain this level of quenching has been found to be 0.049mM and 1.027μM, respectively. Additional fluorescence study with 8-hydroxy-5-quinoline (HQ) as a fluorescence probe for Zn ruled out the dissolution effect of ZnO under the experimental conditions. DNA conjugation on the surface of ZnO was also supported by Raman study. The quantitative variation in conductivity as well as electrophoretic mobility indicated significant interaction of ZnO with the DNA molecule. Circular dichroism (CD) and viscometry titrations provided clear evidence in support of the conformational retention of the DNA on interaction with ZnO. The binding interaction was found to be predominantly entropy driven in nature. The bio-physical studies presented in this paper exploring ZnO-CT DNA interaction could add a new horizon to understand the interaction between metal oxide and DNA.
利用多种生物物理技术对氧化锌(ZnO)与小牛胸腺(CT)DNA结合相互作用的实验证据是本研究的核心关注点。通过吸收光谱研究、荧光滴定、拉曼分析、zeta电位测量、粘度实验以及热变性研究和显微镜分析,对ZnO与CT DNA的相互作用进行了详细研究。稳态荧光研究表明,ZnO与DNA相互作用时,其表面缺陷相关峰强度猝灭了48%。发现获得该猝灭水平的ZnO和DNA的优化浓度分别为0.049mM和1.027μM。以8-羟基-5-喹啉(HQ)作为锌的荧光探针进行的额外荧光研究排除了实验条件下ZnO的溶解效应。拉曼研究也支持了DNA在ZnO表面的共轭作用。电导率和电泳迁移率的定量变化表明ZnO与DNA分子有显著相互作用。圆二色性(CD)和粘度滴定提供了明确证据,支持DNA与ZnO相互作用时构象保持不变。发现结合相互作用本质上主要是由熵驱动的。本文中探索ZnO-CT DNA相互作用的生物物理研究可能为理解金属氧化物与DNA之间的相互作用开辟新的视野。