• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

C 类自由基 S-腺嘌呤基-l-蛋氨酸噻唑甲基转移酶的作用机制。

Mechanism of a Class C Radical S-Adenosyl-l-methionine Thiazole Methyl Transferase.

机构信息

Department of Chemistry, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.

Howard Hughes Medical Institute, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.

出版信息

J Am Chem Soc. 2017 Dec 27;139(51):18623-18631. doi: 10.1021/jacs.7b10203. Epub 2017 Dec 15.

DOI:10.1021/jacs.7b10203
PMID:29190095
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5748327/
Abstract

The past decade has seen the discovery of four different classes of radical S-adenosylmethionine (rSAM) methyltransferases that methylate unactivated carbon centers. Whereas the mechanism of class A is well understood, the molecular details of methylation by classes B-D are not. In this study, we present detailed mechanistic investigations of the class C rSAM methyltransferase TbtI involved in the biosynthesis of the potent thiopeptide antibiotic thiomuracin. TbtI C-methylates a Cys-derived thiazole during posttranslational maturation. Product analysis demonstrates that two SAM molecules are required for methylation and that one SAM (SAM1) is converted to 5'-deoxyadenosine and the second SAM (SAM2) is converted to S-adenosyl-l-homocysteine (SAH). Isotope labeling studies show that a hydrogen is transferred from the methyl group of SAM2 to the 5'-deoxyadenosine of SAM1 and the other two hydrogens of the methyl group of SAM2 appear in the methylated product. In addition, a hydrogen appears to be transferred from the β-position of the thiazole to the methyl group in the product. We also show that the methyl protons in the product can exchange with solvent. A mechanism consistent with these observations is presented that differs from other characterized radical SAM methyltransferases.

摘要

过去十年见证了四类不同的活性 S-腺苷甲硫氨酸(rSAM)甲基转移酶的发现,它们可以甲基化未激活的碳中心。虽然 A 类的机制已经很清楚,但 B-D 类的甲基化分子细节尚不清楚。在这项研究中,我们对涉及强效硫肽抗生素硫霉素生物合成的 C 类 rSAM 甲基转移酶 TbtI 进行了详细的机制研究。TbtI 在翻译后成熟过程中 C-甲基化 Cys 衍生的噻唑。产物分析表明,甲基化需要两个 SAM 分子,一个 SAM(SAM1)转化为 5'-脱氧腺苷,第二个 SAM(SAM2)转化为 S-腺苷-L-同型半胱氨酸(SAH)。同位素标记研究表明,SAM2 的甲基中的一个氢转移到 SAM1 的 5'-脱氧腺苷上,SAM2 的甲基中的另外两个氢出现在甲基化产物中。此外,似乎有一个氢从噻唑的β位置转移到产物中的甲基上。我们还表明,产物中的甲基质子可以与溶剂交换。提出了一个与其他已描述的自由基 SAM 甲基转移酶不同的符合这些观察结果的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/1ff6a731ed8d/ja-2017-10203t_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/0c74828a456c/ja-2017-10203t_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/fc9f8bde6af7/ja-2017-10203t_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/65e6d4aba4d9/ja-2017-10203t_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/1ff6a731ed8d/ja-2017-10203t_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/0c74828a456c/ja-2017-10203t_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/fc9f8bde6af7/ja-2017-10203t_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/65e6d4aba4d9/ja-2017-10203t_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbda/5748327/1ff6a731ed8d/ja-2017-10203t_0004.jpg

相似文献

1
Mechanism of a Class C Radical S-Adenosyl-l-methionine Thiazole Methyl Transferase.C 类自由基 S-腺嘌呤基-l-蛋氨酸噻唑甲基转移酶的作用机制。
J Am Chem Soc. 2017 Dec 27;139(51):18623-18631. doi: 10.1021/jacs.7b10203. Epub 2017 Dec 15.
2
Reconstitution and Substrate Specificity of the Radical S-Adenosyl-methionine Thiazole C-Methyltransferase in Thiomuracin Biosynthesis.硫霉素生物合成中硫杂环腺苷酸噻唑 C-甲基转移酶的重建及其底物特异性。
J Am Chem Soc. 2017 Mar 29;139(12):4310-4313. doi: 10.1021/jacs.7b00693. Epub 2017 Mar 21.
3
The Catalytic Mechanism of the Class C Radical S-Adenosylmethionine Methyltransferase NosN.C 类自由基 S-腺苷甲硫氨酸甲基转移酶 NosN 的催化机制。
Angew Chem Int Ed Engl. 2017 Mar 27;56(14):3857-3861. doi: 10.1002/anie.201609948. Epub 2017 Jan 23.
4
GenK-catalyzed C-6' methylation in the biosynthesis of gentamicin: isolation and characterization of a cobalamin-dependent radical SAM enzyme.GenK 催化庆大霉素生物合成中的 C-6' 甲基化:钴胺素依赖的自由基 SAM 酶的分离与表征。
J Am Chem Soc. 2013 Jun 5;135(22):8093-6. doi: 10.1021/ja312641f. Epub 2013 May 21.
5
NosN, a Radical S-Adenosylmethionine Methylase, Catalyzes Both C1 Transfer and Formation of the Ester Linkage of the Side-Ring System during the Biosynthesis of Nosiheptide.NosN,一种激进的 S-腺苷甲硫氨酸甲基转移酶,在诺西肽生物合成过程中催化 C1 转移和侧环系统酯键的形成。
J Am Chem Soc. 2017 Dec 6;139(48):17438-17445. doi: 10.1021/jacs.7b08492. Epub 2017 Nov 21.
6
Williams-Beuren syndrome-related methyltransferase WBSCR27: cofactor binding and cleavage.Williams-Beuren 综合征相关甲基转移酶 WBSCR27:辅因子结合与切割。
FEBS J. 2020 Dec;287(24):5375-5393. doi: 10.1111/febs.15320. Epub 2020 Apr 20.
7
Phospholipid methylase activity, [3H]S-adenosyl-L-homocysteine binding, and S-adenosyl-L-methionine and S-adenosyl-L-homocysteine levels in rat brain during maturation.大鼠脑成熟过程中磷脂甲基酶活性、[3H]S-腺苷-L-高半胱氨酸结合以及S-腺苷-L-甲硫氨酸和S-腺苷-L-高半胱氨酸水平
J Neurochem. 1985 Jul;45(1):32-6. doi: 10.1111/j.1471-4159.1985.tb05470.x.
8
Refolding of a fully functional flavivirus methyltransferase revealed that S-adenosyl methionine but not S-adenosyl homocysteine is copurified with flavivirus methyltransferase.一种功能完全的黄病毒甲基转移酶的重折叠显示,与黄病毒甲基转移酶共纯化的是S-腺苷甲硫氨酸而非S-腺苷高半胱氨酸。
Protein Sci. 2015 Jan;24(1):117-28. doi: 10.1002/pro.2594. Epub 2014 Dec 11.
9
A radical S-adenosyl-L-methionine enzyme and a methyltransferase catalyze cyclopropane formation in natural product biosynthesis.一种激进的 S-腺苷-L-蛋氨酸酶和一种甲基转移酶在天然产物生物合成中催化环丙烷的形成。
Nat Commun. 2018 Jul 17;9(1):2771. doi: 10.1038/s41467-018-05217-1.
10
Mechanism of -Adenosyl-l-methionine -Methylation by Cobalamin-dependent Radical -Adenosyl-l-methionine Methylase in 1-Amino-2-methylcyclopropanecarboxylic Acid Biosynthesis.1-氨基-2-甲基环丙烷羧酸生物合成中钴胺素依赖性自由基腺苷基-l-蛋氨酸甲基转移酶催化 -Adenosyl-l-蛋氨酸 - 甲基化的机制。
Org Lett. 2022 Dec 16;24(49):8975-8979. doi: 10.1021/acs.orglett.2c03555. Epub 2022 Dec 2.

引用本文的文献

1
Docking and MM study of non-structural protein (NS5) of Japanese Encephalitis Virus (JEV) with some derivatives of adenosyl.日本脑炎病毒(JEV)非结构蛋白(NS5)与腺苷某些衍生物的对接及分子力学研究
Front Chem. 2023 Nov 27;11:1258764. doi: 10.3389/fchem.2023.1258764. eCollection 2023.
2
Functional Diversity of HemN-like Proteins.HemN样蛋白的功能多样性
ACS Bio Med Chem Au. 2022 Jan 18;2(2):109-119. doi: 10.1021/acsbiomedchemau.1c00058. eCollection 2022 Apr 20.
3
Enzymatic Pyridine Aromatization during Thiopeptide Biosynthesis.

本文引用的文献

1
NosN, a Radical S-Adenosylmethionine Methylase, Catalyzes Both C1 Transfer and Formation of the Ester Linkage of the Side-Ring System during the Biosynthesis of Nosiheptide.NosN,一种激进的 S-腺苷甲硫氨酸甲基转移酶,在诺西肽生物合成过程中催化 C1 转移和侧环系统酯键的形成。
J Am Chem Soc. 2017 Dec 6;139(48):17438-17445. doi: 10.1021/jacs.7b08492. Epub 2017 Nov 21.
2
Methylcobalamin-Dependent Radical SAM C-Methyltransferase Fom3 Recognizes Cytidylyl-2-hydroxyethylphosphonate and Catalyzes the Nonstereoselective C-Methylation in Fosfomycin Biosynthesis.依赖甲钴胺的自由基S-腺苷甲硫氨酸C-甲基转移酶Fom3识别胞苷-2-羟乙基膦酸酯并催化磷霉素生物合成中的非立体选择性C-甲基化。
Biochemistry. 2017 Jul 18;56(28):3519-3522. doi: 10.1021/acs.biochem.7b00472. Epub 2017 Jul 7.
3
硫肽生物合成过程中的酶促吡啶环化。
J Am Chem Soc. 2022 Nov 23;144(46):21116-21124. doi: 10.1021/jacs.2c07377. Epub 2022 Nov 9.
4
Making and breaking carbon-carbon bonds in class C radical SAM methyltransferases.C 类自由基 S-腺苷甲硫氨酸甲基转移酶中碳-碳键的形成与断裂。
J Inorg Biochem. 2022 Jan;226:111636. doi: 10.1016/j.jinorgbio.2021.111636. Epub 2021 Oct 22.
5
HutW from Is an Anaerobic Heme-Degrading Enzyme with Unique Functional Properties.HutW 是一种具有独特功能特性的厌氧血红素降解酶。
Biochemistry. 2021 Mar 9;60(9):699-710. doi: 10.1021/acs.biochem.0c00950. Epub 2021 Feb 18.
6
New developments in RiPP discovery, enzymology and engineering.RiPP 发现、酶学和工程的新进展。
Nat Prod Rep. 2021 Jan 1;38(1):130-239. doi: 10.1039/d0np00027b. Epub 2020 Sep 16.
7
New Insight into the Mechanism of Anaerobic Heme Degradation.关于厌氧血红素降解机制的新见解。
Biochemistry. 2019 Nov 19;58(46):4641-4654. doi: 10.1021/acs.biochem.9b00841. Epub 2019 Nov 7.
8
Research progress on adenosine in central nervous system diseases.腺苷在中枢神经系统疾病中的研究进展。
CNS Neurosci Ther. 2019 Sep;25(9):899-910. doi: 10.1111/cns.13190. Epub 2019 Jul 23.
9
Methanogenesis marker protein 10 (Mmp10) from is a radical -adenosylmethionine methylase that unexpectedly requires cobalamin.来自 的产甲烷菌标记蛋白 10(Mmp10)是一种自由基 -腺苷甲硫氨酸甲基转移酶,出乎意料的是它需要钴胺素。
J Biol Chem. 2019 Aug 2;294(31):11712-11725. doi: 10.1074/jbc.RA119.007609. Epub 2019 May 20.
10
A radical S-adenosyl-L-methionine enzyme and a methyltransferase catalyze cyclopropane formation in natural product biosynthesis.一种激进的 S-腺苷-L-蛋氨酸酶和一种甲基转移酶在天然产物生物合成中催化环丙烷的形成。
Nat Commun. 2018 Jul 17;9(1):2771. doi: 10.1038/s41467-018-05217-1.
Watasemycin biosynthesis in : thiazoline C-methylation by a type B radical-SAM methylase homologue.瓦他霉素生物合成研究:一种B型自由基-SAM甲基转移酶同源物催化噻唑啉C-甲基化反应
Chem Sci. 2017 Apr 1;8(4):2823-2831. doi: 10.1039/c6sc03533g. Epub 2017 Jan 19.
4
A B-dependent radical SAM enzyme involved in oxetanocin A biosynthesis.一种参与氧杂环丁烷菌素A生物合成的依赖于B的自由基S-腺苷甲硫氨酸酶。
Nature. 2017 Apr 20;544(7650):322-326. doi: 10.1038/nature21689. Epub 2017 Mar 27.
5
Reconstitution and Substrate Specificity of the Radical S-Adenosyl-methionine Thiazole C-Methyltransferase in Thiomuracin Biosynthesis.硫霉素生物合成中硫杂环腺苷酸噻唑 C-甲基转移酶的重建及其底物特异性。
J Am Chem Soc. 2017 Mar 29;139(12):4310-4313. doi: 10.1021/jacs.7b00693. Epub 2017 Mar 21.
6
The Catalytic Mechanism of the Class C Radical S-Adenosylmethionine Methyltransferase NosN.C 类自由基 S-腺苷甲硫氨酸甲基转移酶 NosN 的催化机制。
Angew Chem Int Ed Engl. 2017 Mar 27;56(14):3857-3861. doi: 10.1002/anie.201609948. Epub 2017 Jan 23.
7
Biosynthesis of Branched Alkoxy Groups: Iterative Methyl Group Alkylation by a Cobalamin-Dependent Radical SAM Enzyme.支链烷氧基的生物合成:钴胺素依赖的自由基 SAM 酶通过迭代甲基烷基化。
J Am Chem Soc. 2017 Feb 8;139(5):1742-1745. doi: 10.1021/jacs.6b10901. Epub 2017 Jan 25.
8
The B-Radical SAM Enzyme PoyC Catalyzes Valine C-Methylation during Polytheonamide Biosynthesis.B-Radical SAM 酶 PoyC 在聚天冬酰胺生物合成中催化缬氨酸 C-甲基化。
J Am Chem Soc. 2016 Dec 7;138(48):15515-15518. doi: 10.1021/jacs.6b06697. Epub 2016 Nov 29.
9
Biosynthetic Timing and Substrate Specificity for the Thiopeptide Thiomuracin.硫肽类噻莫菌素的生物合成时间和底物特异性。
J Am Chem Soc. 2016 Dec 7;138(48):15511-15514. doi: 10.1021/jacs.6b08987. Epub 2016 Oct 13.
10
Mechanistic insights into class B radical-S-adenosylmethionine methylases: ubiquitous tailoring enzymes in natural product biosynthesis.对B类自由基S-腺苷甲硫氨酸甲基转移酶的机制性见解:天然产物生物合成中普遍存在的修饰酶
Curr Opin Chem Biol. 2016 Dec;35:73-79. doi: 10.1016/j.cbpa.2016.08.021. Epub 2016 Sep 12.