• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

发热性惊厥大鼠模型中海马 CA3 区基因共表达网络的时程分析。

Temporal analysis of hippocampal CA3 gene coexpression networks in a rat model of febrile seizures.

机构信息

Department of Pediatrics, Faculdade de Medicina, University of São Paulo (FMUSP), São Paulo, 05403-000, Brazil.

Department of Pediatrics, Faculdade de Medicina, University of São Paulo (FMUSP), São Paulo, 05403-000, Brazil

出版信息

Dis Model Mech. 2018 Jan 29;11(1):dmm029074. doi: 10.1242/dmm.029074.

DOI:10.1242/dmm.029074
PMID:29196444
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5818071/
Abstract

Complex febrile seizures during infancy constitute an important risk factor for development of epilepsy. However, little is known about the alterations induced by febrile seizures that make the brain susceptible to epileptic activity. In this context, the use of animal models of hyperthermic seizures (HS) could allow the temporal analysis of brain molecular changes that arise after febrile seizures. Here, we investigated temporal changes in hippocampal gene coexpression networks during the development of rats submitted to HS. Total RNA samples were obtained from the ventral hippocampal CA3 region at four time points after HS at postnatal day (P) 11 and later used for gene expression profiling. Temporal endpoints were selected for investigating the acute (P12), latent (P30 and P60) and chronic (P120) stages of the HS model. A weighted gene coexpression network analysis was used to characterize modules of coexpressed genes, as these modules might contain genes with similar functions. The transcriptome analysis pipeline consisted of building gene coexpression networks, identifying network modules and hubs, performing gene-trait correlations and examining changes in module connectivity. Modules were functionally enriched to identify functions associated with HS. Our data showed that HS induce changes in developmental, cell adhesion and immune pathways, such as Wnt, Hippo, Notch, Jak-Stat and Mapk. Interestingly, modules involved in cell adhesion, neuronal differentiation and synaptic transmission were activated as early as 1 day after HS. These results suggest that HS trigger transcriptional alterations that could lead to persistent neurogenesis, tissue remodeling and inflammation in the CA3 hippocampus, making the brain prone to epileptic activity.

摘要

婴儿期复杂热性惊厥是癫痫发生的一个重要危险因素。然而,人们对导致大脑易发生癫痫活动的热性惊厥引起的改变知之甚少。在这种情况下,使用高热惊厥(HS)动物模型可以允许对热性惊厥后出现的大脑分子变化进行时间分析。在这里,我们研究了在 HS 后发育过程中大鼠海马基因共表达网络的时间变化。在 HS 后第 11 天和之后的四个时间点从腹侧海马 CA3 区获得总 RNA 样本,并用于基因表达谱分析。选择时间终点来研究 HS 模型的急性(P12)、潜伏(P30 和 P60)和慢性(P120)阶段。使用加权基因共表达网络分析来描述共表达基因模块,因为这些模块可能包含具有相似功能的基因。转录组分析流程包括构建基因共表达网络、识别网络模块和枢纽、进行基因-性状相关性分析以及检查模块连接性的变化。对模块进行功能富集,以确定与 HS 相关的功能。我们的数据表明,HS 诱导发育、细胞黏附和免疫途径的变化,如 Wnt、Hippo、Notch、Jak-Stat 和 Mapk。有趣的是,参与细胞黏附、神经元分化和突触传递的模块早在 HS 后 1 天就被激活。这些结果表明,HS 引发的转录改变可能导致 CA3 海马体中的持续神经发生、组织重塑和炎症,使大脑易发生癫痫活动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/3fd1b026d2f4/dmm-11-029074-g4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/19437e34e50f/dmm-11-029074-g1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/c75eced93bae/dmm-11-029074-g2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/f737d3fc650d/dmm-11-029074-g3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/3fd1b026d2f4/dmm-11-029074-g4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/19437e34e50f/dmm-11-029074-g1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/c75eced93bae/dmm-11-029074-g2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/f737d3fc650d/dmm-11-029074-g3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20b2/5818071/3fd1b026d2f4/dmm-11-029074-g4.jpg

相似文献

1
Temporal analysis of hippocampal CA3 gene coexpression networks in a rat model of febrile seizures.发热性惊厥大鼠模型中海马 CA3 区基因共表达网络的时程分析。
Dis Model Mech. 2018 Jan 29;11(1):dmm029074. doi: 10.1242/dmm.029074.
2
Community structure analysis of transcriptional networks reveals distinct molecular pathways for early- and late-onset temporal lobe epilepsy with childhood febrile seizures.转录网络的社区结构分析揭示了伴有儿童热性惊厥的早发性和晚发性颞叶癫痫的不同分子途径。
PLoS One. 2015 May 26;10(5):e0128174. doi: 10.1371/journal.pone.0128174. eCollection 2015.
3
Hippocampal CA3 transcriptome signature correlates with initial precipitating injury in refractory mesial temporal lobe epilepsy.海马 CA3 转录组特征与耐药性内侧颞叶癫痫的初始促发损伤相关。
PLoS One. 2011;6(10):e26268. doi: 10.1371/journal.pone.0026268. Epub 2011 Oct 14.
4
Transcriptomic analysis reveals distinct adaptive molecular mechanism in the hippocampal CA3 from rats susceptible or not-susceptible to hyperthermia-induced seizures.转录组分析揭示了易感性和不易感性大鼠海马 CA3 区中不同的适应性分子机制。
Sci Rep. 2023 Jun 24;13(1):10265. doi: 10.1038/s41598-023-37535-w.
5
Expression Profiling after Prolonged Experimental Febrile Seizures in Mice Suggests Structural Remodeling in the Hippocampus.小鼠长时间实验性热性惊厥后的表达谱分析表明海马体存在结构重塑。
PLoS One. 2015 Dec 18;10(12):e0145247. doi: 10.1371/journal.pone.0145247. eCollection 2015.
6
Mossy fiber plasticity and enhanced hippocampal excitability, without hippocampal cell loss or altered neurogenesis, in an animal model of prolonged febrile seizures.在长时间热性惊厥动物模型中,苔藓纤维可塑性和海马兴奋性增强,而无海马细胞丢失或神经发生改变。
Hippocampus. 2003;13(3):399-412. doi: 10.1002/hipo.10089.
7
Long-lasting modulation of synaptic plasticity in rat hippocampus after early-life complex febrile seizures.大鼠海马体早期生活复杂性热性惊厥后突触可塑性的持久调节。
Eur J Neurosci. 2010 Sep;32(5):749-58. doi: 10.1111/j.1460-9568.2010.07321.x. Epub 2010 Jul 16.
8
Effects of topiramate on the ultrastructure of synaptic endings in the hippocampal CA1 and CA3 sectors in the rat experimental model of febrile seizures: the first electron microscopy report.发热性惊厥大鼠模型中海马 CA1 和 CA3 区突触末梢超微结构的托吡酯作用:首次电子显微镜报告。
Folia Neuropathol. 2019;57(3):267-276. doi: 10.5114/fn.2019.88456.
9
Complex network analysis of CA3 transcriptome reveals pathogenic and compensatory pathways in refractory temporal lobe epilepsy.CA3 转录组的复杂网络分析揭示了耐药性颞叶癫痫的致病和代偿途径。
PLoS One. 2013 Nov 21;8(11):e79913. doi: 10.1371/journal.pone.0079913. eCollection 2013.
10
Developmental febrile seizures modulate hippocampal gene expression of hyperpolarization-activated channels in an isoform- and cell-specific manner.发育性热性惊厥以亚型和细胞特异性方式调节海马中超级化激活通道的基因表达。
J Neurosci. 2002 Jun 1;22(11):4591-9. doi: 10.1523/JNEUROSCI.22-11-04591.2002.

引用本文的文献

1
In Silico Analysis Uncovers FOXA1 as a Potential Biomarker for Predicting Neoadjuvant Chemotherapy Response in Fine-Needle Aspiration Biopsies.计算机模拟分析揭示FOXA1作为细针穿刺活检中预测新辅助化疗反应的潜在生物标志物。
J Cancer. 2024 Sep 30;15(18):6052-6072. doi: 10.7150/jca.101901. eCollection 2024.
2
Additive interaction between birth asphyxia and febrile seizures on autism spectrum disorder: a population-based study.出生窒息与热性惊厥对自闭症谱系障碍的相加交互作用:一项基于人群的研究。
Mol Autism. 2024 Apr 10;15(1):17. doi: 10.1186/s13229-024-00596-3.
3
Transcriptomic analysis reveals distinct adaptive molecular mechanism in the hippocampal CA3 from rats susceptible or not-susceptible to hyperthermia-induced seizures.

本文引用的文献

1
Polycomb repressive complex 2 (PRC2) silences genes responsible for neurodegeneration.多梳抑制复合体2(PRC2)使导致神经退行性变的基因沉默。
Nat Neurosci. 2016 Oct;19(10):1321-30. doi: 10.1038/nn.4360. Epub 2016 Aug 15.
2
ACAP3 regulates neurite outgrowth through its GAP activity specific to Arf6 in mouse hippocampal neurons.ACAP3通过其对小鼠海马神经元中Arf6特异的GAP活性来调节神经突生长。
Biochem J. 2016 Sep 1;473(17):2591-602. doi: 10.1042/BCJ20160183. Epub 2016 Jun 21.
3
Single-stranded DNA binding protein Ssbp3 induces differentiation of mouse embryonic stem cells into trophoblast-like cells.
转录组分析揭示了易感性和不易感性大鼠海马 CA3 区中不同的适应性分子机制。
Sci Rep. 2023 Jun 24;13(1):10265. doi: 10.1038/s41598-023-37535-w.
4
Fasting-mimicking diet cycles reduce neuroinflammation to attenuate cognitive decline in Alzheimer's models.禁食模拟饮食周期可减少神经炎症,从而减轻阿尔茨海默病模型的认知能力下降。
Cell Rep. 2022 Sep 27;40(13):111417. doi: 10.1016/j.celrep.2022.111417.
5
TGCnA: temporal gene coexpression network analysis using a low-rank plus sparse framework.TGCnA:使用低秩加稀疏框架的时间基因共表达网络分析
J Appl Stat. 2019 Sep 16;47(6):1064-1083. doi: 10.1080/02664763.2019.1667311. eCollection 2020.
6
Hippocampal CA3 transcriptional modules associated with granule cell alterations and cognitive impairment in refractory mesial temporal lobe epilepsy patients.与耐药性内侧颞叶癫痫患者颗粒细胞改变和认知障碍相关的海马 CA3 转录模块。
Sci Rep. 2021 May 13;11(1):10257. doi: 10.1038/s41598-021-89802-3.
7
Transcriptome analysis of rat dorsal hippocampal CA1 after an early life seizure induced by kainic acid.大鼠海马 CA1 区在早期生命期由海人酸诱导癫痫发作后的转录组分析。
Epilepsy Res. 2020 Mar;161:106283. doi: 10.1016/j.eplepsyres.2020.106283. Epub 2020 Jan 30.
8
Regeneration of neurotransmission transcriptome in a model of epileptic encephalopathy after antiinflammatory treatment.抗炎治疗后癫痫性脑病模型中神经传递转录组的再生
Neural Regen Res. 2018 Oct;13(10):1715-1718. doi: 10.4103/1673-5374.238607.
单链DNA结合蛋白Ssbp3诱导小鼠胚胎干细胞分化为滋养层样细胞。
Stem Cell Res Ther. 2016 May 28;7(1):79. doi: 10.1186/s13287-016-0340-1.
4
Rapid, Coordinate Inflammatory Responses after Experimental Febrile Status Epilepticus: Implications for Epileptogenesis.实验性发热性癫痫持续状态后快速、协调的炎症反应:对癫痫发生的影响。
eNeuro. 2015 Nov 9;2(5). doi: 10.1523/ENEURO.0034-15.2015. eCollection 2015 Sep-Oct.
5
Shank3 is localized in axons and presynaptic specializations of developing hippocampal neurons and involved in the modulation of NMDA receptor levels at axon terminals.Shank3定位于发育中海马神经元的轴突和突触前特化结构中,并参与轴突终末NMDA受体水平的调节。
J Neurochem. 2016 Apr;137(1):26-32. doi: 10.1111/jnc.13523. Epub 2016 Jan 24.
6
Expression Profiling after Prolonged Experimental Febrile Seizures in Mice Suggests Structural Remodeling in the Hippocampus.小鼠长时间实验性热性惊厥后的表达谱分析表明海马体存在结构重塑。
PLoS One. 2015 Dec 18;10(12):e0145247. doi: 10.1371/journal.pone.0145247. eCollection 2015.
7
Plic-1, a new target in repressing epileptic seizure by regulation of GABAAR function in patients and a rat model of epilepsy.Plic-1,一种通过调节癫痫患者和大鼠癫痫模型中的GABAAR功能来抑制癫痫发作的新靶点。
Clin Sci (Lond). 2015 Dec;129(12):1207-23. doi: 10.1042/CS20150202. Epub 2015 Sep 28.
8
TMEM119 marks a subset of microglia in the human brain.跨膜蛋白119标记人类大脑中的一部分小胶质细胞。
Neuropathology. 2016 Feb;36(1):39-49. doi: 10.1111/neup.12235. Epub 2015 Aug 6.
9
The Role of Wnt/β-Catenin Signaling Pathway in Disrupted Hippocampal Neurogenesis of Temporal Lobe Epilepsy: A Potential Therapeutic Target?Wnt/β-连环蛋白信号通路在颞叶癫痫海马神经发生紊乱中的作用:一个潜在的治疗靶点?
Neurochem Res. 2015 Jul;40(7):1319-32. doi: 10.1007/s11064-015-1614-1. Epub 2015 May 27.
10
Protein tyrosine phosphatase PTPRT as a regulator of synaptic formation and neuronal development.蛋白酪氨酸磷酸酶 PTPRT 作为突触形成和神经元发育的调节剂。
BMB Rep. 2015 May;48(5):249-55. doi: 10.5483/bmbrep.2015.48.5.037.