从废水系统中分离出的类芽孢杆菌属菌株EZ-K15的基因组序列草图
Draft genome sequence of Paenibacillus sp. EZ-K15 isolated from wastewater systems.
作者信息
Mohammed Waleed S, Ziganshina Elvira E, Shagimardanova Elena I, Gogoleva Natalia E, Ziganshin Ayrat M
机构信息
Department of Microbiology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kremlyovskaya str. 18, Kazan, 420008, Russia.
Department of Biotechnology, Faculty of Agriculture, Al-Azhar University, Cairo, 11651, Egypt.
出版信息
BMC Res Notes. 2017 Dec 12;10(1):734. doi: 10.1186/s13104-017-3069-8.
OBJECTIVES
Paenibacillus species, belonging to the family Paenibacillaceae, are able to survive for long periods under adverse environmental conditions. Several Paenibacillus species produce antimicrobial compounds and are capable of biodegradation of various contaminants; therefore, more investigations at the genomic level are necessary to improve our understanding of their ecology, genetics, as well as potential biotechnological applications.
DATA DESCRIPTION
In the present study, we describe the draft genome sequence of Paenibacillus sp. EZ-K15 that was isolated from nitrocellulose-contaminated wastewater samples. The genome comprises 7,258,662 bp, with a G+C content of 48.6%. This whole genome shotgun project has been deposited at DDBJ/ENA/GenBank under the accession PDHM00000000. Data demonstrated here can be used by other researchers working or studying in the field of whole genome analysis and application of Paenibacillus species in biotechnological processes.
目的
芽孢杆菌属属于芽孢杆菌科，能够在不利的环境条件下长期存活。几种芽孢杆菌属物种能产生抗菌化合物，并能够对各种污染物进行生物降解；因此，有必要在基因组水平上进行更多研究，以增进我们对其生态学、遗传学以及潜在生物技术应用的理解。
数据描述
在本研究中，我们描述了从硝化纤维素污染的废水样本中分离出的芽孢杆菌属菌株EZ-K15的基因组草图序列。该基因组由7,258,662个碱基对组成，G+C含量为48.6%。这个全基因组鸟枪法测序项目已保存在DDBJ/ENA/GenBank中，登录号为PDHM00000000。这里展示的数据可供其他从事芽孢杆菌属全基因组分析以及该属在生物技术过程中的应用研究的人员使用。
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