Biomedical Sciences Research Center 'Alexander Fleming', 34 Fleming Street, Vari, 16672, Athens, Greece.
Nat Commun. 2017 Dec 12;8(1):2076. doi: 10.1038/s41467-017-02145-4.
Complex molecular responses preserve gene expression accuracy and genome integrity in the face of environmental perturbations. Here we report that, in response to UV irradiation, RNA polymerase II (RNAPII) molecules are dynamically and synchronously released from promoter-proximal regions into elongation to promote uniform and accelerated surveillance of the whole transcribed genome. The maximised influx of de novo released RNAPII correlates with increased damage-sensing, as confirmed by RNAPII progressive accumulation at dipyrimidine sites and by the average slow-down of elongation rates in gene bodies. In turn, this transcription elongation 'safe' mode guarantees efficient DNA repair regardless of damage location, gene size and transcription level. Accordingly, we detect low and homogenous rates of mutational signatures associated with UV exposure or cigarette smoke across all active genes. Our study reveals a novel advantage for transcription regulation at the promoter-proximal level and provides unanticipated insights into how active transcription shapes the mutagenic landscape of cancer genomes.
复杂的分子反应能在面对环境干扰时保持基因表达的准确性和基因组的完整性。在这里,我们报告说,在受到紫外线照射时,RNA 聚合酶 II(RNAPII)分子会从启动子近端区域动态且同步地释放到延伸中,以促进对整个转录基因组的均匀和加速监测。新释放的 RNAPII 的最大流入量与损伤感应的增加相关,这一点通过 RNAPII 在二嘧啶位点的逐渐积累和基因体中延伸率的平均减缓得到了证实。反过来,这种转录延伸“安全”模式可以保证无论损伤位置、基因大小和转录水平如何,都能有效地进行 DNA 修复。因此,我们在所有活跃基因中检测到与紫外线照射或香烟烟雾相关的低且均匀的突变特征率。我们的研究揭示了启动子近端水平转录调控的新优势,并为活跃转录如何塑造癌症基因组的诱变景观提供了意想不到的见解。