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从生物通讯角度看病毒tRNA模拟

Viral tRNA Mimicry from a Biocommunicative Perspective.

作者信息

Ariza-Mateos Ascensión, Gómez Jordi

机构信息

Laboratory of RNA Archaeology, Instituto de Parasitología y Biomedicina "López Neyra" (Consejo Superior de Investigaciones Científicas), Granada, Spain.

Centro de Biología Molecular "Severo Ochoa" (CSIC-UAM), Consejo Superior de Investigaciones Científicas (CSIC), Campus de Cantoblanco, Madrid, Spain.

出版信息

Front Microbiol. 2017 Dec 5;8:2395. doi: 10.3389/fmicb.2017.02395. eCollection 2017.

Abstract

RNA viruses have very small genomes which limits the functions they can encode. One of the strategies employed by these viruses is to mimic key factors of the host cell so they can take advantage of the interactions and activities these factors typically participate in. The viral RNA genome itself was first observed to mimic cellular tRNA over 40 years ago. Since then researchers have confirmed that distinct families of RNA viruses are accessible to a battery of cellular factors involved in tRNA-related activities. Recently, potential tRNA-like structures have been detected within the sequences of a 100 mRNAs taken from human cells, one of these being the host defense interferon-alpha mRNA; these are then additional to the examples found in bacterial and yeast mRNAs. The mimetic relationship between tRNA, cellular mRNA, and viral RNA is the central focus of two considerations described below. These are subsequently used as a preface for a final hypothesis drawing on concepts relating to mimicry from the social sciences and humanities, such as power relations and creativity. Firstly, the presence of tRNA-like structures in mRNAs indicates that the viral tRNA-like signal could be mimicking tRNA-like elements that are contextualized by the specific carrier mRNAs, rather than, or in addition to, the tRNA itself, which would significantly increase the number of potential semiotic relations mediated by the viral signals. Secondly, and in particular, mimicking a host defense mRNA could be considered a potential new viral strategy for survival. Finally, we propose that mRNA's mimicry of tRNA could be indicative of an ancestral intracellular conflict in which species of mRNAs invaded the cell, but from within. As the meaning of the mimetic signal depends on the context, in this case, the conflict that arises when the viral signal enters the cell can change the meaning of the mRNAs' internal tRNA-like signals, from their current significance to that they had in the distant past.

摘要

RNA病毒的基因组非常小,这限制了它们能够编码的功能。这些病毒采用的策略之一是模仿宿主细胞的关键因子,以便利用这些因子通常参与的相互作用和活动。40多年前首次观察到病毒RNA基因组本身模仿细胞tRNA。从那时起,研究人员已经证实,不同家族的RNA病毒能够利用一系列参与tRNA相关活动的细胞因子。最近,在从人类细胞中提取的100种mRNA序列中检测到了潜在的tRNA样结构,其中之一是宿主防御性干扰素-α mRNA;这些结构是在细菌和酵母mRNA中发现的例子之外的。tRNA、细胞mRNA和病毒RNA之间的模拟关系是以下两个思考的核心焦点。随后,这些被用作最终假设的前言,该假设借鉴了社会科学和人文学科中与模仿相关的概念,如权力关系和创造力。首先,mRNA中存在tRNA样结构表明,病毒tRNA样信号可能在模仿由特定载体mRNA所界定的tRNA样元件,而不是tRNA本身,或者除tRNA本身之外还模仿tRNA样元件,这将显著增加由病毒信号介导的潜在符号关系的数量。其次,特别是,模仿宿主防御性mRNA可以被认为是病毒生存的一种潜在新策略。最后,我们提出mRNA对tRNA的模仿可能表明存在一种古老的细胞内冲突,在这种冲突中,mRNA物种侵入了细胞,但却是从细胞内部侵入的。由于模拟信号的意义取决于上下文,在这种情况下,当病毒信号进入细胞时出现的冲突可以改变mRNA内部tRNA样信号的意义,从它们当前的意义转变为它们在遥远过去所具有的意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffea/5723415/15211bdec50f/fmicb-08-02395-g001.jpg

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