Reply to Edemir: Physiological regulation and single-cell RNA sequencing.
作者信息
Chen Lihe, Lee Jae Wook, Chou Chung-Lin, Nair Anil V, Battistone Maria A, Păunescu Teodor G, Merkulova Maria, Breton Sylvie, Verlander Jill W, Wall Susan M, Brown Dennis, Burg Maurice B, Knepper Mark A
机构信息
Systems Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD 20892.
Nephrology Clinic, National Cancer Center, Goyang, 10408, South Korea.
出版信息
Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E351-E352. doi: 10.1073/pnas.1720333115. Epub 2018 Jan 8.
Abstract
摘要
相似文献
1
Reply to Edemir: Physiological regulation and single-cell RNA sequencing.回复埃代米尔：生理调节与单细胞RNA测序。
Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E351-E352. doi: 10.1073/pnas.1720333115. Epub 2018 Jan 8.
2
SAVER: gene expression recovery for single-cell RNA sequencing.SAVER：单细胞 RNA 测序的基因表达恢复。
Nat Methods. 2018 Jul;15(7):539-542. doi: 10.1038/s41592-018-0033-z. Epub 2018 Jun 25.
3
Normalization for Single-Cell RNA-Seq Data Analysis.单细胞RNA测序数据分析的归一化
Methods Mol Biol. 2019;1935:11-23. doi: 10.1007/978-1-4939-9057-3_2.
4
High-throughput single-cell RNA sequencing.高通量单细胞RNA测序
Trends Plant Sci. 2022 Jan;27(1):104-105. doi: 10.1016/j.tplants.2021.09.003. Epub 2021 Sep 28.
5
Comparative Analysis of Droplet-Based Ultra-High-Throughput Single-Cell RNA-Seq Systems.基于液滴的超高通量单细胞 RNA-Seq 系统的比较分析。
Mol Cell. 2019 Jan 3;73(1):130-142.e5. doi: 10.1016/j.molcel.2018.10.020. Epub 2018 Nov 21.
6
Reply to The contribution of cell cycle to heterogeneity in single-cell RNA-seq data.对细胞周期在单细胞RNA测序数据中对异质性贡献的回应。
Nat Biotechnol. 2016 May 6;34(6):593-5. doi: 10.1038/nbt.3607.
7
Single-Cell RNA Sequencing of Oligodendrocyte Lineage Cells from the Mouse Central Nervous System.小鼠中枢神经系统少突胶质细胞谱系细胞的单细胞RNA测序
Methods Mol Biol. 2019;1936:1-21. doi: 10.1007/978-1-4939-9072-6_1.
8
SCnorm: robust normalization of single-cell RNA-seq data.SCnorm：单细胞RNA测序数据的稳健归一化
Nat Methods. 2017 Jun;14(6):584-586. doi: 10.1038/nmeth.4263. Epub 2017 Apr 17.
9
RNA structure from deep sequencing.深度测序得到的RNA结构
Nat Biotechnol. 2015 Sep;33(9):928-9. doi: 10.1038/nbt.3338.
10
Comparative Analysis of Single-Cell RNA Sequencing Methods.单细胞 RNA 测序方法的比较分析。
Mol Cell. 2017 Feb 16;65(4):631-643.e4. doi: 10.1016/j.molcel.2017.01.023.
引用本文的文献
1
Sex differences in renal transporters: assessment and functional consequences.性别差异在肾脏转运体中的作用：评估和功能后果。
Nat Rev Nephrol. 2024 Jan;20(1):21-36. doi: 10.1038/s41581-023-00757-2. Epub 2023 Sep 8.
2
Intercalated Cells of the Kidney Collecting Duct in Kidney Physiology.肾脏集合管中的闰细胞在肾脏生理学中的作用。
Semin Nephrol. 2019 Jul;39(4):353-367. doi: 10.1016/j.semnephrol.2019.04.005.
本文引用的文献
1
Considering hypertonicity in the interpretation and analysis of cell type-specific gene expression pattern in the collecting duct.在集合管细胞类型特异性基因表达模式的解释和分析中考虑高渗性。
Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E349-E350. doi: 10.1073/pnas.1720087115. Epub 2018 Jan 8.
2
Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-seq.单细胞 RNA-seq 鉴定的小鼠主要肾集合管细胞类型的转录组。
Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):E9989-E9998. doi: 10.1073/pnas.1710964114. Epub 2017 Oct 31.
3
The Human Cell Atlas: from vision to reality.人类细胞图谱：从愿景到现实。
Nature. 2017 Oct 18;550(7677):451-453. doi: 10.1038/550451a.
4
Psychrophilic proteases dramatically reduce single-cell RNA-seq artifacts: a molecular atlas of kidney development.嗜冷蛋白酶显著减少单细胞RNA测序假象：肾脏发育的分子图谱
Development. 2017 Oct 1;144(19):3625-3632. doi: 10.1242/dev.151142. Epub 2017 Aug 29.
5
Regulation of localization and function of the transcriptional co-activator YAP by angiomotin.血管动蛋白对转录共激活因子YAP的定位和功能的调控
Elife. 2017 May 3;6:e23966. doi: 10.7554/eLife.23966.
6
Deep Sequencing in Microdissected Renal Tubules Identifies Nephron Segment-Specific Transcriptomes.显微切割肾小管中的深度测序鉴定肾单位节段特异性转录组。
J Am Soc Nephrol. 2015 Nov;26(11):2669-77. doi: 10.1681/ASN.2014111067. Epub 2015 Mar 27.
7
E-cadherin mediates contact inhibition of proliferation through Hippo signaling-pathway components.E-钙黏蛋白通过 Hippo 信号通路组分介导接触抑制增殖。
Proc Natl Acad Sci U S A. 2011 Jul 19;108(29):11930-5. doi: 10.1073/pnas.1103345108. Epub 2011 Jul 5.
8
Mystery solved: discovery of a novel integrin ligand in the developing kidney.谜团解开：发育中的肾脏中一种新型整合素配体的发现。
J Cell Biol. 2001 Jul 23;154(2):257-9. doi: 10.1083/jcb.200106124.
9
Signal transduction through beta-catenin and specification of cell fate during embryogenesis.胚胎发育过程中通过β-连环蛋白的信号转导与细胞命运的决定
Genes Dev. 1996 Oct 15;10(20):2527-39. doi: 10.1101/gad.10.20.2527.
10
The junction-associated protein, zonula occludens-1, localizes to the nucleus before the maturation and during the remodeling of cell-cell contacts.连接相关蛋白闭合蛋白-1在细胞间接触成熟之前及重塑过程中定位于细胞核。
Proc Natl Acad Sci U S A. 1996 Oct 1;93(20):10779-84. doi: 10.1073/pnas.93.20.10779.
Zotero 插件