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一种新型的个体水平脑形态网络构建方法及其在PET和MR图像中的评估。

A novel individual-level morphological brain networks constructing method and its evaluation in PET and MR images.

作者信息

Jiang Jiehui, Zhou Hucheng, Duan Huoqiang, Liu Xin, Zuo Chuantao, Huang Zhemin, Yu Zhihua, Yan Zhuangzhi

机构信息

Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China.

Institute of Biomedical Engineering, School of Communication and Information Technology, Shanghai University, Shanghai, China.

出版信息

Heliyon. 2017 Dec 28;3(12):e00475. doi: 10.1016/j.heliyon.2017.e00475. eCollection 2017 Dec.

Abstract

Mapping the human brain is one of the great scientific challenges of the 21st century. Brain network analysis is an effective technique based on graph theory that is widely used to investigate network patterns in the human brain. Currently, mapping an individual brain network using a single image has been a hotspot in the field of brain science; techniques, such as the Kullback-Leibler (KL) method, have applications in structural Magnetic Resonance (MR) imaging. However, maintaining an image's intensity, shape, texture and gradient information during feature extraction is very challenging. In this study, we propose a novel method for individual-level network construction based on the high-resolution Brainnetome Atlas, which shows 246 brain regions. Principal components (PCs) were obtained for each brain region using principal component analysis (PCA) for feature extraction. Individual brain networks were followed and used to construct the PC similarity measurement based on the mutual information (MI) method. To evaluate the robustness of the proposed method, three independent experiments were carried out. In the first, 34 healthy subjects underwent two Carbon 11-labeled Pittsburgh compound B Positron emission tomography (11C-PiB PET) scans; in the second, 32 healthy subjects underwent two structural MRI scans; and in the last, 10 Alzheimer's disease (AD) subjects and 10Healthy Control (HC) subjects underwent 11C-PiB PET scans. For each subject, network metrics including clustering coefficient, path length, small-world coefficient, efficiency and node betweenness centrality were calculated. The results suggested that both the individual PET and structural MRI networks exhibited a good small-word property, and the variances within subjects was also quite small in all metrics, The average value of Coefficient of variation (CV) map was 0.33 and 0.32 for PiB PET and MR images respectively, and intra-class correlation coefficients (ICC) range from approximately 0.4 to 0.7, indicating that the new method was well adapted to the subjects. The results of intra-class correlation coefficients from the test-retest experiment were consistent with previous research employing KL divergence, but with low computational complexity. Further, differences between AD subjects and HC subjects can be observed in network metrics. The method proposed herein provides a new perspective for investigating individual brain connectivity; it would enable neuroscientists to further understand the functions of the human brain.

摘要

绘制人类大脑图谱是21世纪重大的科学挑战之一。脑网络分析是一种基于图论的有效技术,广泛用于研究人类大脑中的网络模式。目前,使用单一图像绘制个体脑网络已成为脑科学领域的一个热点;诸如库尔贝克-莱布勒(KL)方法等技术已应用于结构磁共振(MR)成像。然而,在特征提取过程中保持图像的强度、形状、纹理和梯度信息极具挑战性。在本研究中,我们基于显示246个脑区的高分辨率脑网络图谱,提出了一种用于个体水平网络构建的新方法。使用主成分分析(PCA)对每个脑区进行特征提取以获得主成分(PC)。跟踪个体脑网络并基于互信息(MI)方法构建PC相似性度量。为了评估所提出方法的稳健性,进行了三个独立实验。在第一个实验中,34名健康受试者接受了两次碳-11标记的匹兹堡化合物B正电子发射断层扫描(11C-PiB PET);在第二个实验中,32名健康受试者接受了两次结构MRI扫描;在最后一个实验中,10名阿尔茨海默病(AD)受试者和10名健康对照(HC)受试者接受了11C-PiB PET扫描。对于每个受试者,计算包括聚类系数、路径长度、小世界系数、效率和节点介数中心性在内的网络指标。结果表明,个体PET和结构MRI网络均表现出良好的小世界特性,并且在所有指标中受试者内部的方差也相当小,PiB PET和MR图像的变异系数(CV)图的平均值分别为0.33和0.32,组内相关系数(ICC)范围约为0.4至0.7,表明新方法很好地适用于受试者。重测实验的组内相关系数结果与先前采用KL散度的研究一致,但计算复杂度较低。此外,在网络指标中可以观察到AD受试者和HC受试者之间的差异。本文提出的方法为研究个体脑连接性提供了一个新视角;它将使神经科学家能够进一步了解人类大脑的功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8459/5753611/e756e88a7768/gr1.jpg

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