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多位点序列分型及从中国一家医院分离出的[具体基因名称未给出]基因的变异情况 。

Multilocus sequence typing and variations in the gene of isolated from a hospital in China.

作者信息

Liu Huiqin, Kong Weina, Yang Weina, Chen Gukui, Liang Haihua, Zhang Yani

机构信息

College of Life Sciences, Northwest University, Shaanxi, China.

Department of Clinical Laboratory, The Children's Hospital of Xi'an City, Shaanxi, China.

出版信息

Infect Drug Resist. 2018 Jan 8;11:45-54. doi: 10.2147/IDR.S152162. eCollection 2018.


DOI:10.2147/IDR.S152162
PMID:29386908
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5764299/
Abstract

OBJECTIVES: To provide information about the genetic relationships and mechanism underlying carbapenem resistance in clinical isolates of a hospital in China. MATERIALS AND METHODS: One hundred and sixty strains were isolated from a hospital in China. Susceptibility to 14 antimicrobial agents was determined by antimicrobial susceptibility testing. Multilocus sequence typing was used to characterize the genetic backgrounds of these clinical isolates. Forty-five strains were randomly selected for further evaluation of their carbapenem resistance mechanism. Their gene was compared with the PAO1 sequence. RESULTS: Multilocus sequence typing analysis demonstrated that these isolates were highly diverse; 68 sequence types were identified, of which 28 were novel sequence types. Polygenic and eBURST analysis demonstrated genetically similar clones with dissimilar resistance profiles. Among the 45 randomly selected strains associated with carbapenem resistance, 2 were metallo β-lactamase producers; all the 45 strains were not AmpC overproducers. Sequence analysis revealed a high diversity in the sequences among isolates. Strains susceptible to imipenem and meropenem with shortened L7 and L8 loops in were the major strain types observed in this hospital. CONCLUSION: This study indicated that provided the main mechanism for carbapenem resistance. The shortened L7 and L8 loops are responsible for carbapenem susceptibility.

摘要

目的:提供有关中国一家医院临床分离株中碳青霉烯类耐药性的遗传关系及潜在机制的信息。 材料与方法:从中国一家医院分离出160株菌株。通过抗菌药物敏感性试验测定对14种抗菌药物的敏感性。采用多位点序列分型来表征这些临床分离株的遗传背景。随机选择45株菌株进一步评估其碳青霉烯类耐药机制。将它们的基因与PAO1序列进行比较。 结果:多位点序列分型分析表明这些分离株具有高度多样性;鉴定出68种序列类型,其中28种为新的序列类型。多基因和eBURST分析表明具有不同耐药谱的基因相似克隆。在随机选择的45株与碳青霉烯类耐药相关的菌株中,2株为金属β-内酰胺酶产生菌;所有45株菌株均不是AmpC过度产生菌。序列分析显示分离株之间的序列具有高度多样性。对亚胺培南和美罗培南敏感且 中L7和L8环缩短的菌株是该医院观察到的主要菌株类型。 结论:本研究表明 提供了碳青霉烯类耐药的主要机制。L7和L8环缩短是碳青霉烯类敏感性的原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af49/5764299/0fc9d6842ea7/idr-11-045Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af49/5764299/93c234888106/idr-11-045Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af49/5764299/0fc9d6842ea7/idr-11-045Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af49/5764299/93c234888106/idr-11-045Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af49/5764299/0fc9d6842ea7/idr-11-045Fig2.jpg

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本文引用的文献

[1]
Emergence of colistin resistance in Pseudomonas aeruginosa ST235 clone in South Korea.

Int J Antimicrob Agents. 2017-4-6

[2]
Genetic diversity and population structure of the Bacillus cereus group bacteria from diverse marine environments.

Sci Rep. 2017-4-6

[3]
Carbapenem nonsusceptibility with modified in clinical isolates of from India.

Indian J Med Microbiol. 2017

[4]
Epidemiology and resistance characteristics of Pseudomonas aeruginosa isolates from the respiratory department of a hospital in China.

J Glob Antimicrob Resist. 2017-2-12

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BMC Infect Dis. 2016-8-24

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BMC Microbiol. 2016-6-13

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Int J Antimicrob Agents. 2016-3-24

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Ann Clin Microbiol Antimicrob. 2016-2-24

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J Microbiol. 2016-1

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Antibiotic Resistance of Pseudomonas aeruginosa in Pneumonia at a Single University Hospital Center in Germany over a 10-Year Period.

PLoS One. 2015-10-2

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