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复制定时和核结构。

Replication timing and nuclear structure.

机构信息

Developmental Therapeutics Branch, Center for Cancer Research, National Cancer Institute, 37 Convent Drive, Bethesda, MD 20892, United States.

Developmental Therapeutics Branch, Center for Cancer Research, National Cancer Institute, 37 Convent Drive, Bethesda, MD 20892, United States.

出版信息

Curr Opin Cell Biol. 2018 Jun;52:43-50. doi: 10.1016/j.ceb.2018.01.004. Epub 2018 Feb 4.

DOI:10.1016/j.ceb.2018.01.004
PMID:29414592
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5988923/
Abstract

DNA replication proceeds along spatially and temporally coordinated patterns within the nucleus, thus protecting the genome during the synthesis of new genetic material. While we have been able to visualize replication patterns on DNA fibers for 50 years, recent developments and discoveries have provided a greater insight into how DNA replication is controlled. In this review, we highlight many of these discoveries. Of great interest are the physiological role of the replication timing program, cis and trans-acting factors that modulate replication timing and the effects of chromatin structure on the replication timing program. We also discuss future directions in the study of replication timing.

摘要

DNA 复制沿着细胞核内的时空协调模式进行,从而在合成新遗传物质的过程中保护基因组。虽然我们已经能够在 DNA 纤维上观察复制模式长达 50 年,但最近的发展和发现为我们提供了更多关于 DNA 复制如何受到控制的深入了解。在这篇综述中,我们强调了其中的许多发现。特别引人关注的是复制时间程序的生理作用、调节复制时间的顺式和反式作用因子,以及染色质结构对复制时间程序的影响。我们还讨论了复制时间研究的未来方向。

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本文引用的文献

1
L1 retrotransposon antisense RNA within ASAR lncRNAs controls chromosome-wide replication timing.ASAR lncRNAs 内的 L1 反转录转座子反义 RNA 控制着全染色体复制时间。
J Cell Biol. 2018 Feb 5;217(2):541-553. doi: 10.1083/jcb.201707082. Epub 2017 Dec 29.
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Genomic Analysis of the DNA Replication Timing Program during Mitotic S Phase in Maize () Root Tips.玉米根尖有丝分裂 S 期 DNA 复制定时程序的基因组分析。
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Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses.转录-复制冲突方向调节R环水平并激活不同的DNA损伤反应。
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4
Histone H4K20 tri-methylation at late-firing origins ensures timely heterochromatin replication.在晚期激活的复制起点处,组蛋白H4第20位赖氨酸的三甲基化可确保异染色质的及时复制。
EMBO J. 2017 Sep 15;36(18):2726-2741. doi: 10.15252/embj.201796541. Epub 2017 Aug 4.
5
Phosphorylated SIRT1 associates with replication origins to prevent excess replication initiation and preserve genomic stability.磷酸化的SIRT1与复制起点结合,以防止过度的复制起始并维持基因组稳定性。
Nucleic Acids Res. 2017 Jul 27;45(13):7807-7824. doi: 10.1093/nar/gkx468.
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DNA replication timing influences gene expression level.DNA复制时间影响基因表达水平。
J Cell Biol. 2017 Jul 3;216(7):1907-1914. doi: 10.1083/jcb.201701061. Epub 2017 May 24.
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Nucleic Acids Res. 2017 Jul 27;45(13):7786-7795. doi: 10.1093/nar/gkx463.
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Mouse Rif1 is a regulatory subunit of protein phosphatase 1 (PP1).鼠 Rif1 是蛋白磷酸酶 1(PP1)的调节亚基。
Sci Rep. 2017 May 18;7(1):2119. doi: 10.1038/s41598-017-01910-1.
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DNA replication timing during development anticipates transcriptional programs and parallels enhancer activation.在发育过程中,DNA 复制时间提前于转录程序,并与增强子激活平行。
Genome Res. 2017 Aug;27(8):1406-1416. doi: 10.1101/gr.218602.116. Epub 2017 May 16.
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Stability of patient-specific features of altered DNA replication timing in xenografts of primary human acute lymphoblastic leukemia.原发性人类急性淋巴细胞白血病异种移植中DNA复制时间改变的患者特异性特征的稳定性
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