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基于本体的传染病诊断和抗生素处方临床决策支持系统(IDDAP)。

An ontology-driven clinical decision support system (IDDAP) for infectious disease diagnosis and antibiotic prescription.

机构信息

School of Electronics and Computer Engineering, Peking University Shenzhen Graduate School, Shenzhen, China.

Laboratory CIRTAI/IDEES, Université du Havre, Le Havre Cedex, France.

出版信息

Artif Intell Med. 2018 Mar;86:20-32. doi: 10.1016/j.artmed.2018.01.003. Epub 2018 Feb 9.

Abstract

BACKGROUND

The available antibiotic decision-making systems were developed from a physician's perspective. However, because infectious diseases are common, many patients desire access to knowledge via a search engine. Although the use of antibiotics should, in principle, be subject to a doctor's advice, many patients take them without authorization, and some people cannot easily or rapidly consult a doctor. In such cases, a reliable antibiotic prescription support system is needed.

METHODS AND RESULTS

This study describes the construction and optimization of the sensitivity and specificity of a decision support system named IDDAP, which is based on ontologies for infectious disease diagnosis and antibiotic therapy. The ontology for this system was constructed by collecting existing ontologies associated with infectious diseases, syndromes, bacteria and drugs into the ontology's hierarchical conceptual schema. First, IDDAP identifies a potential infectious disease based on a patient's self-described disease state. Then, the system searches for and proposes an appropriate antibiotic therapy specifically adapted to the patient based on factors such as the patient's body temperature, infection sites, symptoms/signs, complications, antibacterial spectrum, contraindications, drug-drug interactions between the proposed therapy and previously prescribed medication, and the route of therapy administration. The constructed domain ontology contains 1,267,004 classes, 7,608,725 axioms, and 1,266,993 members of "SubClassOf" that pertain to infectious diseases, bacteria, syndromes, anti-bacterial drugs and other relevant components. The system includes 507 infectious diseases and their therapy methods in combination with 332 different infection sites, 936 relevant symptoms of the digestive, reproductive, neurological and other systems, 371 types of complications, 838,407 types of bacteria, 341 types of antibiotics, 1504 pairs of reaction rates (antibacterial spectrum) between antibiotics and bacteria, 431 pairs of drug interaction relationships and 86 pairs of antibiotic-specific population contraindicated relationships. Compared with the existing infectious disease-relevant ontologies in the field of knowledge comprehension, this ontology is more complete. Analysis of IDDAP's performance in terms of classifiers based on receiver operating characteristic (ROC) curve results (89.91%) revealed IDDAP's advantages when combined with our ontology.

CONCLUSIONS AND SIGNIFICANCE

This study attempted to bridge the patient/caregiver gap by building a sophisticated application that uses artificial intelligence and machine learning computational techniques to perform data-driven decision-making at the point of primary care. The first level of decision-making is conducted by the IDDAP and provides the patient with a first-line therapy. Patients can then make a subjective judgment, and if any questions arise, should consult a physician for subsequent decisions, particularly in complicated cases or in cases in which the necessary information is not yet available in the knowledge base.

摘要

背景

现有的抗生素决策系统是从医生的角度开发的。然而,由于传染病很常见,许多患者希望通过搜索引擎获取知识。尽管抗生素的使用原则上应该遵循医生的建议,但许多患者未经授权就使用抗生素,有些人也无法方便或快速地咨询医生。在这种情况下,需要一个可靠的抗生素处方支持系统。

方法和结果

本研究描述了基于传染病诊断和抗生素治疗本体的决策支持系统 IDDAP 的构建和优化。该系统的本体通过将现有的与传染病、综合征、细菌和药物相关的本体收集到本体的层次概念图中构建而成。首先,IDDAP 根据患者自我描述的疾病状态识别潜在的传染病。然后,系统根据患者的体温、感染部位、症状/体征、并发症、抗菌谱、禁忌症、拟议治疗与之前处方药物之间的药物-药物相互作用、以及治疗途径等因素,搜索并提出适合患者的抗生素治疗方案。构建的领域本体包含 1267004 个类、7608725 个公理和 1266993 个“SubClassOf”成员,涉及传染病、细菌、综合征、抗菌药物和其他相关成分。该系统包括 507 种传染病及其治疗方法,结合 332 种不同的感染部位、936 种与消化系统、生殖系统、神经系统等相关的症状、371 种并发症、838407 种细菌、341 种抗生素、1504 对抗生素与细菌之间的反应率(抗菌谱)、431 对药物相互作用关系和 86 对特定人群抗生素禁忌症关系。与知识理解领域现有的传染病相关本体相比,该本体更为完整。基于接收者操作特征(ROC)曲线结果(89.91%)的 IDDAP 性能分析表明,当与我们的本体结合使用时,IDDA 具有优势。

结论和意义

本研究试图通过构建一个复杂的应用程序来弥合患者/护理人员之间的差距,该应用程序使用人工智能和机器学习计算技术在初级保健点进行数据驱动的决策。第一级决策由 IDDAP 执行,并为患者提供一线治疗。然后,患者可以进行主观判断,如果有任何疑问,应咨询医生进行后续决策,特别是在复杂病例或知识库中尚未提供必要信息的情况下。

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