生物信息学循环（BioCyc）微生物基因组和代谢途径集合。
The BioCyc collection of microbial genomes and metabolic pathways.
机构信息
SRI Bioinformatics Research Group (BRG).
SRI International.
出版信息
Brief Bioinform. 2019 Jul 19;20(4):1085-1093. doi: 10.1093/bib/bbx085.
Abstract
BioCyc.org is a microbial genome Web portal that combines thousands of genomes with additional information inferred by computer programs, imported from other databases and curated from the biomedical literature by biologist curators. BioCyc also provides an extensive range of query tools, visualization services and analysis software. Recent advances in BioCyc include an expansion in the content of BioCyc in terms of both the number of genomes and the types of information available for each genome; an expansion in the amount of curated content within BioCyc; and new developments in the BioCyc software tools including redesigned gene/protein pages and metabolite pages; new search tools; a new sequence-alignment tool; a new tool for visualizing groups of related metabolic pathways; and a facility called SmartTables, which enables biologists to perform analyses that previously would have required a programmer's assistance.
摘要
BioCyc.org 是一个微生物基因组的网络门户，它将数千个基因组与计算机程序推断的其他信息结合起来，这些信息从其他数据库导入，并由生物学家编辑人员从生物医学文献中进行整理。BioCyc 还提供了广泛的查询工具、可视化服务和分析软件。BioCyc 的最新进展包括在基因组数量和每个基因组提供的信息类型方面扩展了 BioCyc 的内容；在 BioCyc 中编辑的内容量方面进行了扩展；以及在 BioCyc 软件工具方面的新发展，包括重新设计的基因/蛋白质页面和代谢物页面；新的搜索工具；新的序列比对工具；用于可视化相关代谢途径组的新工具；以及称为 SmartTables 的工具，它使生物学家能够进行以前需要程序员帮助的分析。
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