• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从大豆中分离得到的植物病原菌生物防治剂AGVL-005菌株的全基因组序列

Closed Genome Sequence of Phytopathogen Biocontrol Agent Strain AGVL-005, Isolated from Soybean.

作者信息

Pylro Victor Satler, Dias Armando Cavalcante Franco, Andreote Fernando Dini, Morais Daniel Kumazawa, Varani Alessandro de Mello, Andreote Cristiane Cipolla Fasanella, Bernardo Eduardo Roberto de Almeida, Zucchi Tiago

机构信息

Soil Microbiology Laboratory, Luiz de Queiroz College of Agriculture, University of São Paulo (ESALQ/USP), Piracicaba, Sao Paulo, Brazil

Andrios Assessoria, Piracicaba, Sao Paulo, Brazil.

出版信息

Genome Announc. 2018 Feb 15;6(7):e00057-18. doi: 10.1128/genomeA.00057-18.

DOI:10.1128/genomeA.00057-18
PMID:29449392
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5814484/
Abstract

We report here the closed and near-complete genome sequence and annotation of strain AGVL-005, a bacterium isolated from soybean seeds in Brazil and used for phytopathogen biocontrol.

摘要

我们在此报告菌株AGVL-005的封闭且近乎完整的基因组序列及注释,该菌株是从巴西大豆种子中分离出来的,用于植物病原体的生物防治。

相似文献

1
Closed Genome Sequence of Phytopathogen Biocontrol Agent Strain AGVL-005, Isolated from Soybean.从大豆中分离得到的植物病原菌生物防治剂AGVL-005菌株的全基因组序列
Genome Announc. 2018 Feb 15;6(7):e00057-18. doi: 10.1128/genomeA.00057-18.
2
Closed Genome Sequence of Bacillus paralicheniformis Strain CBMAI 1303, a Bacterium Applied for Phytopathogen Biocontrol.解淀粉芽孢杆菌菌株CBMAI 1303的全基因组序列,该菌株是一种用于植物病原菌生物防治的细菌。
Microbiol Resour Announc. 2019 Jan 17;8(3). doi: 10.1128/MRA.01507-18. eCollection 2019 Jan.
3
Complete genome sequence of Bacillus velezensis LM2303, a biocontrol strain isolated from the dung of wild yak inhabited Qinghai-Tibet plateau.从青藏高原野生牦牛粪便中分离得到的生防菌株贝莱斯芽孢杆菌LM2303的全基因组序列
J Biotechnol. 2017 Jun 10;251:124-127. doi: 10.1016/j.jbiotec.2017.04.034. Epub 2017 Apr 28.
4
Draft Genome Sequence of an Endophytic Biocontrol Bacterium, Bacillus velezensis PG12, Isolated from Apple Fruit.从苹果果实中分离的内生生物防治细菌贝莱斯芽孢杆菌PG12的基因组序列草图
Microbiol Resour Announc. 2019 Oct 10;8(41):e00468-19. doi: 10.1128/MRA.00468-19.
5
Biofilm Formation and Synthesis of Antimicrobial Compounds by the Biocontrol Agent Bacillus velezensis QST713 in an Compost Micromodel.生物膜形成和生防菌解淀粉芽孢杆菌 QST713 在堆肥微模型中合成抗菌化合物。
Appl Environ Microbiol. 2019 May 30;85(12). doi: 10.1128/AEM.00327-19. Print 2019 Jun 15.
6
Complete genome sequence of Bacillus velezensis M75, a biocontrol agent against fungal plant pathogens, isolated from cotton waste.从棉花废料中分离得到的对植物真菌病原体具有生物防治作用的贝莱斯芽孢杆菌M75的全基因组序列
J Biotechnol. 2017 Jan 10;241:112-115. doi: 10.1016/j.jbiotec.2016.11.023. Epub 2016 Nov 27.
7
Complete Genome Sequence of Bacillus velezensis Strain AL7, a Biocontrol Agent for Suppression of Cotton Wilt.抑制棉花枯萎病的生防菌贝莱斯芽孢杆菌AL7菌株的全基因组序列
Microbiol Resour Announc. 2020 Feb 20;9(8):e01595-19. doi: 10.1128/MRA.01595-19.
8
Genome Sequence Resource of Bacillus velezensis Strain ML61, a Potential Biocontrol Bacterium Isolated from the Rhizosphere of Bok Choy (Brassica rapa var. ).解淀粉芽孢杆菌菌株ML61的基因组序列资源,ML61是从小白菜(芜菁变种)根际分离得到的一种潜在生防细菌。
Microbiol Resour Announc. 2023 Apr 18;12(4):e0131122. doi: 10.1128/mra.01311-22. Epub 2023 Mar 14.
9
Seed-borne endophytic Bacillus velezensis LHSB1 mediate the biocontrol of peanut stem rot caused by Sclerotium rolfsii.种子内生解淀粉芽孢杆菌 LHSB1 介导对花生茎腐病由立枯丝核菌引起的生物防治。
J Appl Microbiol. 2020 Mar;128(3):803-813. doi: 10.1111/jam.14508. Epub 2019 Nov 20.
10
Genomic and metabolic traits endow Bacillus velezensis CC09 with a potential biocontrol agent in control of wheat powdery mildew disease.基因组和代谢特性赋予贝莱斯芽孢杆菌CC09作为一种潜在生物防治剂来防治小麦白粉病的能力。
Microbiol Res. 2017 Mar;196:89-94. doi: 10.1016/j.micres.2016.12.007. Epub 2016 Dec 30.

本文引用的文献

1
Canu: scalable and accurate long-read assembly via adaptive -mer weighting and repeat separation.Canu:通过自适应k-mer加权和重复序列分离实现可扩展且准确的长读长序列拼接
Genome Res. 2017 May;27(5):722-736. doi: 10.1101/gr.215087.116. Epub 2017 Mar 15.
2
is not a later heterotypic synonym of ; , subsp. and '' are later heterotypic synonyms of based on phylogenomics.不是 的晚出异名;基于系统发育基因组学, 、 亚种 和“ ”是 的晚出异名。
Int J Syst Evol Microbiol. 2016 Mar;66(3):1212-1217. doi: 10.1099/ijsem.0.000858. Epub 2015 Dec 24.
3
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.JSpeciesWS:一个基于成对基因组比较进行原核生物物种界定的网络服务器。
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
4
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM:评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
5
PATRIC, the bacterial bioinformatics database and analysis resource.PATRIC,细菌生物信息学数据库和分析资源。
Nucleic Acids Res. 2014 Jan;42(Database issue):D581-91. doi: 10.1093/nar/gkt1099. Epub 2013 Nov 12.
6
QUAST: quality assessment tool for genome assemblies.QUAST:基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.
7
SIS: a program to generate draft genome sequence scaffolds for prokaryotes.SIS:一个用于生成原核生物基因组序列草图支架的程序。
BMC Bioinformatics. 2012 May 14;13:96. doi: 10.1186/1471-2105-13-96.
8
Shifting the genomic gold standard for the prokaryotic species definition.动摇原核生物种定义的基因组黄金标准。
Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):19126-31. doi: 10.1073/pnas.0906412106. Epub 2009 Oct 23.
9
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities.DNA-DNA杂交值及其与全基因组序列相似性的关系。
Int J Syst Evol Microbiol. 2007 Jan;57(Pt 1):81-91. doi: 10.1099/ijs.0.64483-0.