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盐土叶杆菌新种,从兰萨罗特岛盐渍土壤中的披针叶百脉根根瘤中分离得到。

Phyllobacterium salinisoli sp. nov., isolated from a Lotus lancerottensis root nodule in saline soil from Lanzarote.

作者信息

León-Barrios Milagros, Ramírez-Bahena Martha Helena, Igual José M, Peix Álvaro, Velázquez Encarna

机构信息

Departamento de Bioquímica, Microbiología, Biología Celular y Genética. Universidad de La Laguna, Tenerife, Spain.

Instituto de Recursos Naturales y Agrobiología de Salamanca. Consejo Superior de Investigaciones Científicas (IRNASA-CSIC), Salamanca, Spain.

出版信息

Int J Syst Evol Microbiol. 2018 Apr;68(4):1085-1089. doi: 10.1099/ijsem.0.002628. Epub 2018 Feb 13.

Abstract

A Gram-negative rod, designated strain LLAN61, was isolated from a root nodule of Lotus lancerottensis growing in a saline soil sample from Lanzarote (Canary Islands). The strain grew optimally at 0.5 % (w/v) NaCl and tolerated up to 3.5 %. The 16S rRNA gene sequence analysis showed that strain LLAN61 belonged to genus Phyllobacterium and that Phyllobacteriumleguminum ORS 1419 and Phyllobacteriummyrsinacearum IAM 13584 are the closest related species with 97.93 and 97.86% similarity values, respectively. In the atpD phylogeny, P. leguminum ORS 1419 and P. myrsinacearum ATCC 43591, sharing similarities of 87.6 and 85.8% respectively, were also the closest species to strain LLAN61. DNA-DNA hybridization showed an average value of 21 % between strain LLAN61 and P. leguminum LMG 22833, and 6 % with P. myrsinacearum ATCC 43590. The predominant fatty acids were C19 : 0 cyclo ω8c and C18 : 1ω6c/C18 : 1ω7c (summed feature 8). The DNA G+C content was 58.0 mol%. Strain LLAN61 differed from its closest relatives in some culture conditions and in assimilation of several carbon sources. Based upon the results of phylogeny, DNA-DNA hybridization, phenotypic tests and fatty acid analysis, this strain should be classified as a novel species of Phyllobacterium for which the name Phyllobacterium salinisoli sp. nov. is proposed (type strain LLAN61=LMG 30173 = CECT 9417).

摘要

从生长在兰萨罗特岛(加那利群岛)盐渍土壤样本中的披针叶百脉根根瘤中分离出一株革兰氏阴性杆菌,命名为LLAN61菌株。该菌株在0.5%(w/v)NaCl浓度下生长最佳,可耐受高达3.5%的NaCl浓度。16S rRNA基因序列分析表明,LLAN61菌株属于叶杆菌属,其中豆科叶杆菌ORS 1419和紫金牛叶杆菌IAM 13584是与其亲缘关系最近的物种,相似性值分别为97.93%和97.86%。在atpD系统发育中,豆科叶杆菌ORS 1419和紫金牛叶杆菌ATCC 43591也分别是与LLAN61菌株亲缘关系最近的物种,相似性分别为87.6%和85.8%。DNA-DNA杂交显示,LLAN61菌株与豆科叶杆菌LMG 22833之间的平均值为21%,与紫金牛叶杆菌ATCC 43590的平均值为6%。主要脂肪酸为C19 : 0环ω8c和C18 : 1ω6c/C18 : 1ω7c(总和特征8)。DNA G+C含量为58.0 mol%。LLAN61菌株在一些培养条件和几种碳源的同化方面与其亲缘关系最近的菌株有所不同。基于系统发育、DNA-DNA杂交、表型测试和脂肪酸分析结果,该菌株应被归类为叶杆菌属的一个新物种,提议将其命名为盐土叶杆菌(Phyllobacterium salinisoli sp. nov.)(模式菌株LLAN61 = LMG 30173 = CECT 9417)。

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