Grant Gregory A
Departments of Developmental Biology and Medicine , Washington University School of Medicine , 660 South Euclid Avenue , Box 8103, St. Louis , Missouri 63110 , United States.
Biochemistry. 2018 Mar 20;57(11):1798-1806. doi: 10.1021/acs.biochem.8b00074. Epub 2018 Mar 6.
The equilibrium of the reaction catalyzed by d-3-phosphoglycerate dehydrogenase (PGDH), the first enzyme in the l-serine biosynthetic pathway, is far in the direction away from serine synthesis. As such, the enzyme is usually assayed in this direction. To easily assay it in the direction of l-serine synthesis, it can be coupled to the next enzyme in the pathway, phosphoserine aminotransferase (PSAT), with the activity monitored by the conversion of NAD to NADH by PGDH. However, when PGDHs from several different species were coupled to PSAT, it was found that one of them, ecPGDH, conserves the coenzyme in the production of l-serine by utilizing an intrinsic cycle of NAD/NADH interconversion coupled with the conversion of α-ketoglutarate (αKG) to α-hydroxyglutarate. Furthermore, the cycle can be maintained by production of αKG by the second enzyme in the pathway, PSAT, and does not require any additional enzymes. This is not the case for PGDH from another bacterial source, Mycobacterium tuberculosis, and a mammalian source, human liver, where net consumption of NAD occurs. Both NAD and NADH appear to remain tightly bound to ecPGDH during the cycle, effectively removing a requirement for the presence of an exogenous coenzyme pool to maintain the pathway and significantly reducing the energy requirement needed to maintain this major metabolic pathway.
d-3-磷酸甘油酸脱氢酶(PGDH)是l-丝氨酸生物合成途径中的首个酶,其催化的反应平衡严重偏向于远离丝氨酸合成的方向。因此,该酶通常按此方向进行测定。为了便于在l-丝氨酸合成方向上对其进行测定,可以将其与该途径中的下一个酶——磷酸丝氨酸转氨酶(PSAT)偶联,通过PGDH将NAD转化为NADH来监测活性。然而,当将来自几种不同物种的PGDH与PSAT偶联时,发现其中一种,即大肠杆菌PGDH(ecPGDH),通过利用NAD/NADH相互转化的内在循环以及α-酮戊二酸(αKG)向α-羟基戊二酸的转化,在l-丝氨酸的产生过程中保留了辅酶。此外,该循环可以通过该途径中的第二个酶PSAT产生αKG来维持,并且不需要任何其他酶。来自另一种细菌来源结核分枝杆菌以及哺乳动物来源人肝脏的PGDH则并非如此,在那里会发生NAD的净消耗。在这个循环过程中,NAD和NADH似乎都与ecPGDH紧密结合,有效地消除了维持该途径所需外源性辅酶库的存在要求,并显著降低了维持这一主要代谢途径所需的能量需求。